RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SMOQ99835 787 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 NACA2Q9H009 215 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 TNMDQ9H2S6 317 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SLC39A2Q9NP94 309 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 SPHK2Q9NRA0 654 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 FAM49BQ9NUQ9 324 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
CAPN3-220ENST00000569827 KBTBD4Q9NVX7 518 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 PLK2Q9NYY3 685 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 TBC1D14Q9P2M4 693 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 DEC1Q9P2X7 70 aa12.79□□□□□ -0.36
CAPN3-220ENST00000569827 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-220ENST00000569827 RTN3O95197 1032 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-220ENST00000569827 PDCP20941 246 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 MAOBP27338 520 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 ADORA2BP29275 332 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 RING1Q06587 406 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-220ENST00000569827 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-220ENST00000569827 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 SPOPLQ6IQ16 392 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 CACUL1Q86Y37 369 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 HDDC3Q8N4P3 179 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 TRIML1Q8N9V2 468 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 SMARCD1Q96GM5 515 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 CEP295NLQ96MC4 621 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 CAPN10Q9HC96 672 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 DMAP1Q9NPF5 467 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-220ENST00000569827 OSER1Q9NX31 292 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 PLXNA2O75051 1894 aa12.78□□□□□ -0.36
CAPN3-220ENST00000569827 NYNRINQ9P2P1 1898 aaKnown RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 LRRIQ3A6PVS8 624 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 CYP26A1O43174 497 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 AP5Z1O43299 807 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 TLR5O60602 858 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 VNN1O95497 513 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 TYRP14679 529 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 NTSR1P30989 418 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 AFMP43652 599 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 NASPP49321 788 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 DLG4P78352 724 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 DUOXA1Q1HG43 343 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 C12orf29Q8N999 325 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 LINC00301Q8NCQ3 95 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-220ENST00000569827 BBS2Q9BXC9 721 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 ATP8B3O60423 1300 aa12.77□□□□□ -0.37
CAPN3-220ENST00000569827 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 SHROOM3Q8TF72 1996 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 DOCK9Q9BZ29 2069 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 SMG1Q96Q15 3661 aaKnown RBP12.76□□□□□ -0.37
CAPN3-220ENST00000569827 TAF4O00268 1085 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 SPTLC2O15270 562 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 SH3BP5O60239 455 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 GREM1O60565 184 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 EXOC3O60645 756 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 OPHN1O60890 802 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 SERPINF2P08697 491 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 CD59P13987 128 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 NDST1P52848 882 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 CUL4BQ13620 913 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 NCOA4Q13772 614 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
CAPN3-220ENST00000569827 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-220ENST00000569827 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 IL37Q9NZH6 218 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
CAPN3-220ENST00000569827 A0A1W2PQH9 124 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 MUC22E2RYF6 1773 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-220ENST00000569827 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
CAPN3-220ENST00000569827 STX6O43752 255 aa12.75□□□□□ -0.37
CAPN3-220ENST00000569827 UBE4BO95155 1302 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms