RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ADAM9Q13443 819 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 PPP1R26Q5T8A7 1209 aaPredicted RBP14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 PMS2CLQ68D20 193 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 INTS8Q75QN2 995 aaKnown RBP14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 DDX42Q86XP3 938 aaKnown RBP eCLIP14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 OLIG1Q8TAK6 271 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 RLN3Q8WXF3 142 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 CYFIP2Q96F07 1278 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 CYP3A43Q9HB55 503 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 TMEM8AQ9HCN3 771 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 SCML2Q9UQR0 700 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 ADAMTS9Q9P2N4 1935 aa14.62□□□□□ -0.07
GTF3C1-211ENST00000569653 ACO1P21399 889 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 SDHBP21912 280 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 PSMC2P35998 433 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 PRCPP42785 496 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 KIF11P52732 1056 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 MRPS21P82921 87 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 ENPEPQ07075 957 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CBWD6Q4V339 395 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 ZNF394Q53GI3 561 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 PPM1JQ5JR12 505 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CBWD3Q5JTY5 395 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CBWD5Q5RIA9 395 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 ZC3H3Q8IXZ2 948 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 SLC4A11Q8NBS3 891 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 ENGASEQ8NFI3 743 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 TATDN2Q93075 761 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CNTNAP3BQ96NU0 1288 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 NT5C1AQ9BXI3 368 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CNTNAP3Q9BZ76 1288 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 CD248Q9HCU0 757 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 SPHK2Q9NRA0 654 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 TBC1D14Q9P2M4 693 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 MBD1Q9UIS9 605 aaPredicted RBP14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 SH3BP1Q9Y3L3 701 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 PCDHGA5Q9Y5G8 931 aa14.61□□□□□ -0.07
GTF3C1-211ENST00000569653 BCLAF3A2AJT9 711 aaKnown RBP14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 PATE3B3GLJ2 98 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 TULP2O00295 520 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 KLKB1P03952 638 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 APODP05090 189 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 ADRB1P08588 477 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 GRIA2P42262 883 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 LIMK1P53667 647 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 RAD23BP54727 409 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 GAD2Q05329 585 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 EDRF1Q3B7T1 1238 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 STPG1Q5TH74 334 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 Q6ZNB5 142 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 TOGARAM2Q6ZUX3 1019 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 HTR3DQ70Z44 454 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 OTUB2Q96DC9 234 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 ACOX2Q99424 681 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 FBXO44Q9H4M3 255 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.6□□□□□ -0.074e-7■■■■■ 26.8
GTF3C1-211ENST00000569653 USP3Q9Y6I4 520 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 AKAP13Q12802 2813 aa14.6□□□□□ -0.07
GTF3C1-211ENST00000569653 TRIM49BA6NDI0 452 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 PRRT4C9JH25 899 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 RARGP13631 454 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 KRT13P13646 458 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 P2RY2P41231 377 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 TNFRSF4P43489 277 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 MXI1P50539 228 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 CREB5Q02930 508 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 ANO4Q32M45 955 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 MAP7D1Q3KQU3 841 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 EGFLAMQ63HQ2 1017 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 KRT39Q6A163 491 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 ANKRD40Q6AI12 368 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 BHLHA9Q7RTU4 235 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 TERB1Q8NA31 727 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 SPATA20Q8TB22 786 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 NDRG1Q92597 394 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 ERLEC1Q96DZ1 483 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 DUSP16Q9BY84 665 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 TLR8Q9NR97 1041 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 CISHQ9NSE2 258 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 CACNA1EQ15878 2313 aa14.59□□□□□ -0.07
GTF3C1-211ENST00000569653 A0A1W2PQF6 199 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 CACNG3O60359 315 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 STC2O76061 302 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 KIF20AO95235 890 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 RPL13P26373 211 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 GBP1P32455 592 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 GTF2H1P32780 548 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 WASP42768 502 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 KIAA1211LQ6NV74 962 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 CCDC186Q7Z3E2 898 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 TTC30AQ86WT1 665 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 UBR7Q8N806 425 aa14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 C12orf50Q8NA57 414 aaPredicted RBP14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 CCDC47Q96A33 483 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-211ENST00000569653 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms