RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
NSMCE1-214ENST00000569236 NCANO14594 1321 aa13.2□□□□□ -0.3
NSMCE1-214ENST00000569236 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 M0R296 226 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 UCHL3P15374 230 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 PFKLP17858 780 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 HDCP19113 662 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 RFX1P22670 979 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 PFKPQ01813 784 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 BST2Q10589 180 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 LCLAT1Q6UWP7 414 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 YAF2Q8IY57 180 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 ARL14EPQ8N8R7 260 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 SHC3Q92529 594 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 ASIC4Q96FT7 647 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 CYP2S1Q96SQ9 504 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 NAPGQ99747 312 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 KIF9Q9HAQ2 790 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 WNT16Q9UBV4 365 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
NSMCE1-214ENST00000569236 EFCAB8A8MWE9 144 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 PRR33A8MZF0 331 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 M0QYV0 167 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 AKR1B10O60218 316 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 GDI1P31150 447 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 KIF5AQ12840 1032 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 CNGA2Q16280 664 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 IRF7Q92985 503 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 USP13Q92995 863 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 LACRTQ9GZZ8 138 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 BRD9Q9H8M2 597 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 GMIPQ9P107 970 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
NSMCE1-214ENST00000569236 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 MED7O43513 233 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 CALCAP01258 141 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 GNA15P30679 374 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 RAPGEF1Q13905 1077 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 NAA30Q147X3 362 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 SNX30Q5VWJ9 437 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 LRRN4CLQ8ND94 238 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 AJAP1Q9UKB5 411 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 DAAM1Q9Y4D1 1078 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 PCDHA13Q9Y5I0 950 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TULP2O00295 520 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 CYP26A1O43174 497 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TUBP50607 506 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TKTL1P51854 596 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 RAB41Q5JT25 222 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 SIX5Q8N196 739 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 TTC16Q8NEE8 873 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 DNASE1L2Q92874 299 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 LRRC3BQ96PB8 259 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 CARD6Q9BX69 1037 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 MFSD1Q9H3U5 465 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 THG1LQ9NWX6 298 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 CA14Q9ULX7 337 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
NSMCE1-214ENST00000569236 FOXN3O00409 490 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-214ENST00000569236 CHADO15335 359 aa13.16□□□□□ -0.3
NSMCE1-214ENST00000569236 PJA2O43164 708 aa13.16□□□□□ -0.3
NSMCE1-214ENST00000569236 THAP12O43422 761 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms