RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 C2CD6Q53TS8 623 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 PLEKHA7Q6IQ23 1121 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 LLGL2Q6P1M3 1020 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 SLC26A9Q7LBE3 791 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 KIAA1328Q86T90 577 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 SCAMP5Q8TAC9 235 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 GIPC2Q8TF65 315 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 RFFLQ8WZ73 363 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 MCRS1Q96EZ8 462 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 PIWIL1Q96J94 861 aaKnown RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 FAM161BQ96MY7 647 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 ASNSD1Q9NWL6 643 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 CNOT8Q9UFF9 292 aaKnown RBP10.96□□□□□ -0.65
CDH3-210ENST00000569117 PYCARDQ9ULZ3 195 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 SCML2Q9UQR0 700 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 SCINQ9Y6U3 715 aa10.96□□□□□ -0.65
CDH3-210ENST00000569117 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.66
CDH3-210ENST00000569117 REV3LO60673 3130 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 BTNL10A8MVZ5 291 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 BHMG1C9JSJ3 638 aaPredicted RBP10.95□□□□□ -0.66
CDH3-210ENST00000569117 PJA2O43164 708 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 XYLBO75191 536 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 RFPL2O75678 378 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 GLI1P08151 1106 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 USP17L7P0C7H9 530 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 JUNDP17535 347 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 YWHAQP27348 245 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 SERPINB4P48594 390 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 EPHA5P54756 1037 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 GPC5P78333 572 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 TCEAL1Q15170 157 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 FAM102AQ5T9C2 384 aaPredicted RBP10.95□□□□□ -0.66
CDH3-210ENST00000569117 OR6B2Q6IFH4 312 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 DNAJC24Q6P3W2 148 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 ZNF662Q6ZS27 426 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 TMC8Q8IU68 726 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 RHOT2Q8IXI1 618 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 ELMOD1Q8N336 334 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 PDZD8Q8NEN9 1154 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
CDH3-210ENST00000569117 CLEC4CQ8WTT0 213 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 OVCA2Q8WZ82 227 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 ARHGEF26Q96DR7 871 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 SLITRK1Q96PX8 696 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 TRIM62Q9BVG3 475 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 PRKD2Q9BZL6 878 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 PARVAQ9NVD7 372 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
CDH3-210ENST00000569117 PPP2R2CQ9Y2T4 447 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 NOTCH4Q99466 2003 aa10.95□□□□□ -0.66
CDH3-210ENST00000569117 A0A0A6YYK5 440 aaPredicted RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 YJEFN3A6XGL0 299 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 E7ENQ6 273 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 GOLGA8SH3BPF8 625 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 CCL16O15467 120 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 LINC01565O15544 149 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 NCK2O43639 380 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 HSF2BPO75031 334 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 TBX10O75333 385 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 TADA3O75528 432 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 DAB1O75553 588 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 MTA2O94776 668 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 ZDHHC11BP0C7U3 371 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 DEKP35659 375 aaKnown RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 HADHBP55084 474 aaKnown RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 SLC6A3Q01959 620 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 TAF10Q12962 218 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 ADAM15Q13444 863 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 MAMLD1Q13495 774 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 EFHC1Q5JVL4 640 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 BEND5Q7L4P6 421 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 ARCQ7LC44 396 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 DNAJB7Q7Z6W7 309 aaPredicted RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 ARHGAP18Q8N392 663 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 LEMD2Q8NC56 503 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 FBXO32Q969P5 355 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 ZNF707Q96C28 371 aaPredicted RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 SELENOOQ9BVL4 669 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 TSGA10Q9BZW7 698 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 ASAH2Q9NR71 780 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 METTL5Q9NRN9 209 aaKnown RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 GMIPQ9P107 970 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 TMEM59LQ9UK28 342 aa10.94□□□□□ -0.66
CDH3-210ENST00000569117 MAGED2Q9UNF1 606 aaPredicted RBP10.94□□□□□ -0.66
CDH3-210ENST00000569117 PCDHB9Q9Y5E1 797 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms