RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 K7EQS6 105 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 TULP2O00295 520 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 IRF1P10914 325 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 ADH5P11766 374 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 FNTBP49356 437 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 TKTL1P51854 596 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 GAD2Q05329 585 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 PKDCCQ504Y2 493 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 IRF2BP1Q8IU81 584 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 RUBCNQ92622 972 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 CNOT6LQ96LI5 555 aaKnown RBP21.33■■□□□ 1.01
CLK3-225ENST00000569063 INTS2Q9H0H0 1204 aaKnown RBP21.33■■□□□ 1.01
CLK3-225ENST00000569063 NUP62CLQ9H1M0 184 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 SPHK2Q9NRA0 654 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 NUDT5Q9UKK9 219 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 CNTN6Q9UQ52 1028 aa21.33■■□□□ 1.01
CLK3-225ENST00000569063 A0A0A0MRY4 1105 aa21.32■■□□□ 1
CLK3-225ENST00000569063 MDM4O15151 490 aa21.32■■□□□ 1
CLK3-225ENST00000569063 HOXC11O43248 304 aaPredicted RBP21.32■■□□□ 1
CLK3-225ENST00000569063 ZBED1O96006 694 aa21.32■■□□□ 1
CLK3-225ENST00000569063 SETSIPP0DME0 302 aa21.32■■□□□ 1
CLK3-225ENST00000569063 CNR2P34972 360 aa21.32■■□□□ 1
CLK3-225ENST00000569063 SLC6A11P48066 632 aa21.32■■□□□ 1
CLK3-225ENST00000569063 STILQ15468 1287 aa21.32■■□□□ 1
CLK3-225ENST00000569063 CNGA2Q16280 664 aa21.32■■□□□ 1
CLK3-225ENST00000569063 SYT13Q7L8C5 426 aa21.32■■□□□ 1
CLK3-225ENST00000569063 RPLP0P6Q8NHW5 317 aa21.32■■□□□ 1
CLK3-225ENST00000569063 UBA3Q8TBC4 463 aa21.32■■□□□ 1
CLK3-225ENST00000569063 KCTD13Q8WZ19 329 aa21.32■■□□□ 1
CLK3-225ENST00000569063 KREMEN1Q96MU8 473 aa21.32■■□□□ 1
CLK3-225ENST00000569063 PNKPQ96T60 521 aa21.32■■□□□ 1
CLK3-225ENST00000569063 ZSWIM1Q9BR11 485 aa21.32■■□□□ 1
CLK3-225ENST00000569063 LSM7Q9UK45 103 aaKnown RBP21.32■■□□□ 1
CLK3-225ENST00000569063 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.32■■□□□ 1
CLK3-225ENST00000569063 SLC8A2Q9UPR5 921 aa21.32■■□□□ 1
CLK3-225ENST00000569063 CCDC163A0A0D9SF12 145 aa21.31■■□□□ 1
CLK3-225ENST00000569063 HOXC13P31276 330 aa21.31■■□□□ 1
CLK3-225ENST00000569063 ZNF132P52740 706 aa21.31■■□□□ 1
CLK3-225ENST00000569063 YWHAGP61981 247 aaKnown RBP eCLIP21.31■■□□□ 1
CLK3-225ENST00000569063 BHLHA9Q7RTU4 235 aa21.31■■□□□ 1
CLK3-225ENST00000569063 WDR5BQ86VZ2 330 aa21.31■■□□□ 1
CLK3-225ENST00000569063 C12orf40Q86WS4 652 aa21.31■■□□□ 1
CLK3-225ENST00000569063 TMEM25Q86YD3 366 aa21.31■■□□□ 1
CLK3-225ENST00000569063 CREBRFQ8IUR6 639 aa21.31■■□□□ 1
CLK3-225ENST00000569063 CAMKK1Q8N5S9 505 aa21.31■■□□□ 1
CLK3-225ENST00000569063 RBBP8NLQ8NC74 664 aaPredicted RBP21.31■■□□□ 1
CLK3-225ENST00000569063 SLC35F5Q8WV83 523 aa21.31■■□□□ 1
CLK3-225ENST00000569063 ULBP1Q9BZM6 244 aa21.31■■□□□ 1
CLK3-225ENST00000569063 LRRC4Q9HBW1 653 aa21.31■■□□□ 1
CLK3-225ENST00000569063 SMG5Q9UPR3 1016 aaKnown RBP21.31■■□□□ 1
CLK3-225ENST00000569063 CFAP54Q96N23 3096 aa21.3■■□□□ 1
CLK3-225ENST00000569063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.3■■□□□ 1
CLK3-225ENST00000569063 HRO43593 1189 aa21.3■■□□□ 1
CLK3-225ENST00000569063 STC2O76061 302 aa21.3■■□□□ 1
CLK3-225ENST00000569063 ERCC5P28715 1186 aaPredicted RBP21.3■■□□□ 1
CLK3-225ENST00000569063 COG7P83436 770 aa21.3■■□□□ 1
CLK3-225ENST00000569063 DPCR1Q3MIW9 517 aa21.3■■□□□ 1
CLK3-225ENST00000569063 HEATR6Q6AI08 1181 aaKnown RBP21.3■■□□□ 1
CLK3-225ENST00000569063 Q6ZNB5 142 aa21.3■■□□□ 1
CLK3-225ENST00000569063 ETFBKMTQ8IXQ9 262 aa21.3■■□□□ 1
CLK3-225ENST00000569063 SCML4Q8N228 414 aa21.3■■□□□ 1
CLK3-225ENST00000569063 PHTF2Q8N3S3 785 aa21.3■■□□□ 1
CLK3-225ENST00000569063 USP33Q8TEY7 942 aa21.3■■□□□ 1
CLK3-225ENST00000569063 ACDQ96AP0 544 aa21.3■■□□□ 1
CLK3-225ENST00000569063 THAP9Q9H5L6 903 aa21.3■■□□□ 1
CLK3-225ENST00000569063 KAT7O95251 611 aa21.29■■□□□ 1
CLK3-225ENST00000569063 GRIA2P42262 883 aa21.29■■□□□ 1
CLK3-225ENST00000569063 ADIGQ0VDE8 80 aa21.29■■□□□ 1
CLK3-225ENST00000569063 MESP2Q0VG99 397 aa21.29■■□□□ 1
CLK3-225ENST00000569063 BTBD8Q5XKL5 378 aa21.29■■□□□ 1
CLK3-225ENST00000569063 TRIM65Q6PJ69 517 aa21.29■■□□□ 1
CLK3-225ENST00000569063 ENOSF1Q7L5Y1 443 aa21.29■■□□□ 1
CLK3-225ENST00000569063 MIB1Q86YT6 1006 aa21.29■■□□□ 1
CLK3-225ENST00000569063 FAM81BQ96LP2 452 aa21.29■■□□□ 1
CLK3-225ENST00000569063 IPO9Q96P70 1041 aaKnown RBP21.29■■□□□ 1
CLK3-225ENST00000569063 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
CLK3-225ENST00000569063 CNGB3Q9NQW8 809 aa21.29■■□□□ 1
CLK3-225ENST00000569063 POLR3BQ9NW08 1133 aaPredicted RBP21.29■■□□□ 1
CLK3-225ENST00000569063 DACH1Q9UI36 760 aa21.29■■□□□ 1
CLK3-225ENST00000569063 GTPBP10A4D1E9 387 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 APODP05090 189 aa21.28■■□□□ 1
CLK3-225ENST00000569063 BRD2P25440 801 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 TNFRSF4P43489 277 aa21.28■■□□□ 1
CLK3-225ENST00000569063 MRPS21P82921 87 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 EFEMP1Q12805 493 aa21.28■■□□□ 1
CLK3-225ENST00000569063 DMC1Q14565 340 aa21.28■■□□□ 1
CLK3-225ENST00000569063 TPD52L1Q16890 204 aaPredicted RBP21.28■■□□□ 1
CLK3-225ENST00000569063 ANO4Q32M45 955 aa21.28■■□□□ 1
CLK3-225ENST00000569063 PREPLQ4J6C6 727 aaPredicted RBP21.28■■□□□ 1
CLK3-225ENST00000569063 RSRC2Q7L4I2 434 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 SIX6OS1Q8N1H7 587 aa21.28■■□□□ 1
CLK3-225ENST00000569063 NDRG1Q92597 394 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 SECISBP2LQ93073 1101 aaKnown RBP21.28■■□□□ 1
CLK3-225ENST00000569063 GBP4Q96PP9 640 aa21.28■■□□□ 1
CLK3-225ENST00000569063 CRACR2AQ9BSW2 395 aa21.28■■□□□ 1
CLK3-225ENST00000569063 ARHGEF4Q9NR80 690 aa21.28■■□□□ 1
CLK3-225ENST00000569063 MARK1Q9P0L2 795 aa21.28■■□□□ 1
CLK3-225ENST00000569063 MARCH2Q9P0N8 246 aa21.28■■□□□ 1
CLK3-225ENST00000569063 RASAL2Q9UJF2 1139 aa21.28■■□□□ 1
CLK3-225ENST00000569063 ZNF510Q9Y2H8 683 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms