RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 CHORDC1Q9UHD1 332 aaPredicted RBP13.23□□□□□ -0.29
SNX29-207ENST00000568949 A0A087WV48 116 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
SNX29-207ENST00000568949 CER1O95813 267 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 ZDHHC11BP0C7U3 371 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 MAOBP27338 520 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
SNX29-207ENST00000568949 DBX2Q6ZNG2 339 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 BAHD1Q8TBE0 780 aaPredicted RBP13.22□□□□□ -0.29
SNX29-207ENST00000568949 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
SNX29-207ENST00000568949 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 KIF2CQ99661 725 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 B3GNT5Q9BYG0 378 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 CCSER2Q9H7U1 834 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 CD93Q9NPY3 652 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 CACNA2D2Q9NY47 1150 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 USP36Q9P275 1121 aaKnown RBP13.22□□□□□ -0.29
SNX29-207ENST00000568949 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
SNX29-207ENST00000568949 ATP8B3O60423 1300 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 FAM92AA1XBS5 289 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 FRMD3A2A2Y4 597 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 MEI4A8MW99 385 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 NEDD8-MDP1E9PL57 170 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 CLDN5O00501 218 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 NCAM1P13591 858 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 TYRP14679 529 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 MATKP42679 507 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 ZNF132P52740 706 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
SNX29-207ENST00000568949 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 CBWD2Q8IUF1 395 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 SCUBE3Q8IX30 993 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 GALNT15Q8N3T1 639 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 SCAMP5Q8TAC9 235 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 WBP2Q969T9 261 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 TOE1Q96GM8 510 aaKnown RBP13.21□□□□□ -0.29
SNX29-207ENST00000568949 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 NACA2Q9H009 215 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 SLC6A17Q9H1V8 727 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 GAREM1Q9H706 876 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 IL21RQ9HBE5 538 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 TOR4AQ9NXH8 423 aa13.21□□□□□ -0.29
SNX29-207ENST00000568949 WSB2Q9NYS7 404 aaPredicted RBP13.21□□□□□ -0.29
SNX29-207ENST00000568949 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
SNX29-207ENST00000568949 TRABD2BA6NFA1 517 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 A8MXQ7 604 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 NPC1O15118 1278 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 BCAT2O15382 392 aaPredicted RBP13.2□□□□□ -0.3
SNX29-207ENST00000568949 FLRT2O43155 660 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 GREM1O60565 184 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 CILPO75339 1184 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
SNX29-207ENST00000568949 CISD3P0C7P0 127 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 IRF1P10914 325 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 IDEP14735 1019 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 GJB2P29033 226 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 SLC5A3P53794 718 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 TNNC1P63316 161 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 CYP4F3Q08477 520 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 WDR72Q3MJ13 1102 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 USP49Q70CQ1 688 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
SNX29-207ENST00000568949 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 KCNK16Q96T55 309 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.39e-36■■■■■ 857.1
SNX29-207ENST00000568949 GMIPQ9P107 970 aa13.2□□□□□ -0.3
SNX29-207ENST00000568949 FNDC3AQ9Y2H6 1198 aaKnown RBP13.2□□□□□ -0.3
SNX29-207ENST00000568949 METTL12A8MUP2 240 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 TLR5O60602 858 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 ATXN1LP0C7T5 689 aaKnown RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 OXTRP30559 389 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 DGKGP49619 791 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 C19orf57Q0VDD7 668 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 STARD3Q14849 445 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 HLA-BQ31612 363 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms