RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MON1BQ7L1V2 547 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.55■□□□□ 0.4
COMMD4-224ENST00000568877 CMTM8Q8IZV2 173 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ZNF276Q8N554 614 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
COMMD4-224ENST00000568877 SMARCD2Q92925 531 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 FAM149B1Q96BN6 582 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 PIWIL1Q96J94 861 aaKnown RBP17.55■□□□□ 0.4
COMMD4-224ENST00000568877 CCDC42Q96M95 316 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ASB16Q96NS5 453 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 SLC22A12Q96S37 553 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 CYP2S1Q96SQ9 504 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 CDK5RAP1Q96SZ6 601 aaKnown RBP17.55■□□□□ 0.4
COMMD4-224ENST00000568877 TRIM62Q9BVG3 475 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 RNF38Q9H0F5 515 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ISCUQ9H1K1 167 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ABCC13Q9NSE7 274 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ASNSD1Q9NWL6 643 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 STRIP2Q9ULQ0 834 aa17.55■□□□□ 0.4
COMMD4-224ENST00000568877 ZNF638Q14966 1978 aaKnown RBP17.54■□□□□ 0.4
COMMD4-224ENST00000568877 LOC730098B7Z3J9 87 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 COCHO43405 550 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 AKR1B10O60218 316 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 TBX18O95935 607 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 CKMP06732 381 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 GLI1P08151 1106 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 FECHP22830 423 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 ATP5C1P36542 298 aaKnown RBP17.54■□□□□ 0.4
COMMD4-224ENST00000568877 SCNN1AP37088 669 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 GSDMDP57764 484 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 YWHAZP63104 245 aaKnown RBP17.54■□□□□ 0.4
COMMD4-224ENST00000568877 ZP2Q05996 745 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 GFPT1Q06210 699 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-224ENST00000568877 TAF5Q15542 800 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 SLC18A3Q16572 532 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 BEND5Q7L4P6 421 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 SLC26A9Q7LBE3 791 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 TADA2BQ86TJ2 420 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 ARID3BQ8IVW6 561 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-224ENST00000568877 MCOLN2Q8IZK6 566 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 ZDHHC14Q8IZN3 488 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 EDEM1Q92611 657 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 VCPIP1Q96JH7 1222 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 WDR35Q9P2L0 1181 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 NUDT5Q9UKK9 219 aa17.54■□□□□ 0.4
COMMD4-224ENST00000568877 GOLGA8SH3BPF8 625 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 HSF2BPO75031 334 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 FYNP06241 537 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 NCAM1P13591 858 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 GSCP56915 257 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-224ENST00000568877 SLC7A9P82251 487 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 C10orf120Q5SQS8 335 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 CCDC122Q5T0U0 273 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 FAM102AQ5T9C2 384 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-224ENST00000568877 ALKBH5Q6P6C2 394 aaKnown RBP17.53■□□□□ 0.4
COMMD4-224ENST00000568877 KLHDC10Q6PID8 442 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
COMMD4-224ENST00000568877 PHLDB2Q86SQ0 1253 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 DNAAF5Q86Y56 855 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 TMTC1Q8IUR5 882 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 RNF139Q8WU17 664 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 KHSRPQ92945 711 aaKnown RBP eCLIP17.53■□□□□ 0.4
COMMD4-224ENST00000568877 NACA2Q9H009 215 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 TRPV4Q9HBA0 871 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 POPDC2Q9HBU9 364 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 NENFQ9UMX5 172 aa17.53■□□□□ 0.4
COMMD4-224ENST00000568877 MYO16Q9Y6X6 1858 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 ANHXE9PGG2 379 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 CAPN9O14815 690 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 GRAP2O75791 330 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 PRAMEF12O95522 483 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 MBL2P11226 248 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-224ENST00000568877 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 PARM1Q6UWI2 310 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 MTSS1LQ765P7 747 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 CCDC170Q8IYT3 715 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 USP13Q92995 863 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-224ENST00000568877 SLC2A13Q96QE2 648 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 BAG1Q99933 345 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-224ENST00000568877 SMG9Q9H0W8 520 aaKnown RBP17.52■□□□□ 0.4
COMMD4-224ENST00000568877 ZFP14Q9HCL3 533 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 OLA1Q9NTK5 396 aaKnown RBP17.52■□□□□ 0.4
COMMD4-224ENST00000568877 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 ARHGAP26Q9UNA1 814 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 NAALADL1Q9UQQ1 740 aa17.52■□□□□ 0.4
COMMD4-224ENST00000568877 OBSL1O75147 1896 aa17.52■□□□□ 0.39
COMMD4-224ENST00000568877 C19orf67A6NJJ6 358 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 MDM4O15151 490 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 RRM1P23921 792 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 FCARP24071 287 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 VIPR2P41587 438 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 RNASE9P60153 205 aaKnown RBP17.51■□□□□ 0.39
COMMD4-224ENST00000568877 EFEMP1Q12805 493 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 HTR4Q13639 388 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 SYPL2Q5VXT5 272 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 MSANTD2Q6P1R3 559 aa17.51■□□□□ 0.39
COMMD4-224ENST00000568877 DEFB106AQ8N104 65 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms