RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 IFNKQ9P0W0 207 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 LIMA1Q9UHB6 759 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 BTBD3Q9Y2F9 522 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 MYO18AQ92614 2054 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 SCN1AP35498 2009 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 LRRC10BA6NIK2 292 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 ARHGAP6O43182 974 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 HIP1RO75146 1068 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 EIF2S3P41091 472 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 STX17P56962 302 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 MYO1EQ12965 1108 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 DHCR24Q15392 516 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 TAF12Q16514 161 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 NFIL3Q16649 462 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 RHBDF2Q6PJF5 856 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 CSGALNACT2Q8N6G5 542 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 C2orf15Q8WU43 125 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 KCNN1Q92952 543 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 HVCN1Q96D96 273 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 TRMT2BQ96GJ1 504 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 ST6GALNAC4Q9H4F1 302 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 LARSQ9P2J5 1176 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 FNDC3AQ9Y2H6 1198 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 COL6A6A6NMZ7 2263 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 ANAPC1Q9H1A4 1944 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
VPS9D1-207ENST00000568691 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 NFATC1O95644 943 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 GNA14O95837 355 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CKMP06732 381 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 TPM2P07951 284 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CLTAP09496 248 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CSH1P0DML2 217 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CSH2P0DML3 217 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CLDN6P56747 220 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KDSRQ06136 332 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 NR1H3Q13133 447 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 BYSLQ13895 437 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SMAD1Q15797 465 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 PTPRNQ16849 979 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 HSF5Q4G112 596 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 EOGTQ5NDL2 527 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SCARA3Q6AZY7 606 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 JADE1Q6IE81 842 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SLC36A4Q6YBV0 504 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 RABEPKQ7Z6M1 372 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 PGBD3Q8N328 593 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CCDC150Q8NCX0 1101 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 TMEM161BQ8NDZ6 487 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SCFD1Q8WVM8 642 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 PNKPQ96T60 521 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 DUSP9Q99956 384 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 NTPCRQ9BSD7 190 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 SLC6A17Q9H1V8 727 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 CGNQ9P2M7 1197 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 KNL1Q8NG31 2342 aa12.67□□□□□ -0.38
VPS9D1-207ENST00000568691 ITIH6Q6UXX5 1313 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 TRIM49BA6NDI0 452 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 H0YCG3 227 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 LEFTY2O00292 366 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 PDXKO00764 312 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 TRIM24O15164 1050 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 NFICP08651 508 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 NDUFV2P19404 249 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 CYP2F1P24903 491 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 PMS1P54277 932 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 CFHR1Q03591 330 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 KRT31Q15323 416 aa12.66□□□□□ -0.38
VPS9D1-207ENST00000568691 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms