RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
GTF3C1-209ENST00000568569 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
GTF3C1-209ENST00000568569 ATP8B3O60423 1300 aa12.51□□□□□ -0.41
GTF3C1-209ENST00000568569 ASXL3Q9C0F0 2248 aa12.51□□□□□ -0.41
GTF3C1-209ENST00000568569 A0A1B0GTW7 788 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 EIF4E1BA6NMX2 242 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 MEI4A8MW99 385 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 PRRT4C9JH25 899 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 GFRA2O00451 464 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 CST3P01034 146 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 ZDHHC11BP0C7U3 371 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 DLATP10515 647 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 TYRP14679 529 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 MAOBP27338 520 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 CD6P30203 668 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 HTR3DQ70Z44 454 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 SLCO6A1Q86UG4 719 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 DNASE2BQ8WZ79 361 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 WBP2Q969T9 261 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 SLC6A17Q9H1V8 727 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 MARK1Q9P0L2 795 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 GMIPQ9P107 970 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 WDR35Q9P2L0 1181 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 RAD54BQ9Y620 910 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
GTF3C1-209ENST00000568569 BPTFQ12830 3046 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 HELZ2Q9BYK8 2649 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 URB1O60287 2271 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 FAM92AA1XBS5 289 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 TLR5O60602 858 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 CER1O95813 267 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 TNNI1P19237 187 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 STAT6P42226 847 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 GOLGA8FQ08AF8 430 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 GOLGA8DPQ0D2H9 430 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 STARD3Q14849 445 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 RABEP1Q15276 862 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SNRNP35Q16560 246 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 IL27RAQ6UWB1 636 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 METTL3Q86U44 580 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 FAM35AQ86V20 835 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 CCDC65Q8IXS2 484 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 ZCCHC9Q8N567 271 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 CADM4Q8NFZ8 388 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SETD7Q8WTS6 366 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 TOE1Q96GM8 510 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 BBC3Q96PG8 261 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.417e-11■■■■■ 86.9
GTF3C1-209ENST00000568569 COMMD8Q9NX08 183 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 FBXO2Q9UK22 296 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 LSM7Q9UK45 103 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
GTF3C1-209ENST00000568569 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 NEFLP07196 543 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 NCAM1P13591 858 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 MATKP42679 507 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 DGKGP49619 791 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 TRPC3Q13507 836 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 TPGS1Q6ZTW0 290 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 SYAP1Q96A49 352 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 TNIP3Q96KP6 325 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 CGRRF1Q99675 332 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 CDC6Q99741 560 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 MIR1-1HGQ9H1L0 117 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 GAREM1Q9H706 876 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 TM7SF3Q9NS93 570 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 KRT82Q9NSB4 513 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 USP36Q9P275 1121 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 CLIC4Q9Y696 253 aa12.48□□□□□ -0.41
GTF3C1-209ENST00000568569 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 FLRT2O43155 660 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 GREM1O60565 184 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 CILPO75339 1184 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 AP1G2O75843 785 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 DKK1O94907 266 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 ATICP31939 592 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 ZNF132P52740 706 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 PSMD6Q15008 389 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 FUT11Q495W5 492 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms