RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SH2D3AQ9BRG2 576 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-250ENST00000568290 BRD8Q9H0E9 1235 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 C1orf21Q9H246 121 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 MROH8Q9H579 483 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 ZWILCHQ9H900 591 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 DNAJC17Q9NVM6 304 aaKnown RBP7.94□□□□□ -1.14
ATXN3-250ENST00000568290 NDE1Q9NXR1 346 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 NSMCE4AQ9NXX6 385 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 ERAP1Q9NZ08 941 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 ZC3H7BQ9UGR2 993 aaKnown RBP7.94□□□□□ -1.14
ATXN3-250ENST00000568290 DCDC2Q9UHG0 476 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATXN3-250ENST00000568290 APOBEC2Q9Y235 224 aaKnown RBP7.94□□□□□ -1.14
ATXN3-250ENST00000568290 LRRC42Q9Y546 428 aa7.94□□□□□ -1.14
ATXN3-250ENST00000568290 SPDYE5A6NIY4 337 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 PSMD3O43242 534 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 GLRA3O75311 464 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CILPO75339 1184 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RGS20O76081 388 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ENDOD1O94919 500 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 APOA4P06727 396 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 SRGAP2CP0DJJ0 459 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CCDC130P13994 396 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 PDGFRAP16234 1089 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 DPEP1P16444 411 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 MX2P20592 715 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ATP6V1C1P21283 382 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 PRKCHP24723 683 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 DNAJB1P25685 340 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 MIPP30301 263 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 FOXN2P32314 431 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ARL4AP40617 200 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 PTPN9P43378 593 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ASPAP45381 313 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 MMP16P51512 607 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RAD23BP54727 409 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 AIF1P55008 147 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RPL26P61254 145 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CCNA1P78396 465 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 XIAPP98170 497 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 KLC1Q07866 573 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 INCA1Q0VD86 236 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 TMEM132DQ14C87 1099 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 TAF1BQ53T94 588 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 FSCBQ5H9T9 825 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CELF3Q5SZQ8 465 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 OR6B2Q6IFH4 312 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CAPRIN2Q6IMN6 1127 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 IRGCQ6NXR0 463 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 AAGABQ6PD74 315 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 MTHFD1LQ6UB35 978 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 TIFABQ6ZNK6 161 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 FASTKD5Q7L8L6 764 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 OTOAQ7RTW8 1153 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CLNKQ7Z7G1 428 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ZNF410Q86VK4 478 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 NUDCD3Q8IVD9 361 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CTAGE3PQ8IX95 158 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CYP4X1Q8N118 509 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 BEST2Q8NFU1 509 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 GSDMBQ8TAX9 411 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 DCAKDQ8WVC6 231 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 DNAJC9Q8WXX5 260 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 JADE3Q92613 823 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 E2F7Q96AV8 911 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RMDN2Q96LZ7 410 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 HEXIM2Q96MH2 286 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 TSNARE1Q96NA8 513 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 ACAP3Q96P50 834 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 TBC1D10AQ9BXI6 508 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 NPHS2Q9NP85 383 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 EIF2B3Q9NR50 452 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 THAP1Q9NVV9 213 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 IL1RAPL1Q9NZN1 696 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 MORF4L1Q9UBU8 362 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
ATXN3-250ENST00000568290 SCOCQ9UIL1 159 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 AGAP1Q9UPQ3 857 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 CHKBQ9Y259 395 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 LRCH1Q9Y2L9 728 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 RIPK3Q9Y572 518 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 DOCK1Q14185 1865 aa7.93□□□□□ -1.14
ATXN3-250ENST00000568290 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
ATXN3-250ENST00000568290 A0A0G2JND7 137 aa7.92□□□□□ -1.14
ATXN3-250ENST00000568290 MAGEB16A2A368 324 aa7.92□□□□□ -1.14
ATXN3-250ENST00000568290 C3orf70A6NLC5 250 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-250ENST00000568290 ERI2A8K979 691 aaKnown RBP7.92□□□□□ -1.14
ATXN3-250ENST00000568290 NVLO15381 856 aaKnown RBP7.92□□□□□ -1.14
ATXN3-250ENST00000568290 NCAM2O15394 837 aa7.92□□□□□ -1.14
ATXN3-250ENST00000568290 GCATO75600 419 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms