RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MXRA8Q9BRK3 442 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 ADNPQ9H2P0 1102 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 KCND2Q9NZV8 630 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 NWD2Q9ULI1 1742 aa11.27□□□□□ -0.6
PALB2-206ENST00000568219 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 TYROBPO43914 113 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 GMNNO75496 209 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 TCEA3O75764 348 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 BBOX1O75936 387 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 CD48P09326 243 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 ZFXP17010 805 aaPredicted RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 ADGRD1Q6QNK2 874 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 MOXD1Q6UVY6 613 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 CATSPER1Q8NEC5 780 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 HDAC11Q96DB2 347 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 WDR55Q9H6Y2 383 aaPredicted RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 RGPD2P0DJD1 1756 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 E5RJQ4 531 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 DLDP09622 509 aaKnown RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 CA8P35219 290 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 KIF19Q2TAC6 998 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 KYQ8NBH2 561 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 PLEKHO2Q8TD55 490 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 CD101Q93033 1021 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 TASP1Q9H6P5 420 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 PPP1R1BQ9UD71 204 aaPredicted RBP11.27□□□□□ -0.61
PALB2-206ENST00000568219 CDH22Q9UJ99 828 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 POMPQ9Y244 141 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
PALB2-206ENST00000568219 GOLGA8TH3BQL2 631 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MAGEB2O15479 319 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZNF862O60290 1169 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 IFRD2Q12894 506 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 ITGADQ13349 1161 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MYO1HQ8N1T3 1032 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PQLC1Q8N2U9 271 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZMAT2Q96NC0 199 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 FAM49BQ9NUQ9 324 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PAK5Q9P286 719 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 LTN1O94822 1766 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 COL1A1P02452 1464 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 EDIL3O43854 480 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ECE2O60344 883 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PSMD10O75832 226 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 TMEM63AO94886 807 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 SERPINA6P08185 405 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CPA3P15088 417 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 RBL1P28749 1068 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 TBCCQ15814 346 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZNF667Q5HYK9 610 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 C16orf89Q6UX73 402 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 PID1Q7Z2X4 250 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 EXOC8Q8IYI6 725 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 GFM2Q969S9 779 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 FBXO40Q9UH90 709 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 SH3GLB1Q9Y371 365 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 hCG_1818297A0A087WSY0 165 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 CYP3A7P24462 503 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 EPHA3P29320 983 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 STIP1P31948 543 aaKnown RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 MYL6P60660 151 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ACTR2P61160 394 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MPP3Q13368 585 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 LSAMPQ13449 338 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 LPIN1Q14693 890 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 ZNF677Q86XU0 584 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 MTMR12Q9C0I1 747 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 DRC3Q9H069 523 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 KLHL25Q9H0H3 589 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 NRDE2Q9H7Z3 1164 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 TCF7L2Q9NQB0 619 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 DMAC2Q9NW81 257 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 APOL1O14791 398 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 SIN3BO75182 1162 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 F7P08709 466 aaPredicted RBP11.26□□□□□ -0.61
PALB2-206ENST00000568219 THRAP10827 490 aa11.26□□□□□ -0.61
PALB2-206ENST00000568219 AVPR1AP37288 418 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms