RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 TPGS1Q6ZTW0 290 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 CLEC20AQ6ZU45 233 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 UNC93AQ86WB7 457 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 MIB1Q86YT6 1006 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 TMEFF1Q8IYR6 380 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 DEFB119Q8N690 84 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 KIAA1958Q8N8K9 716 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 PIGKQ92643 395 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 BHMTQ93088 406 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 CYFIP2Q96F07 1278 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 KLF16Q9BXK1 252 aaPredicted RBP16.14■□□□□ 0.17
CDR2-206ENST00000567406 GDPD2Q9HCC8 539 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDR2-206ENST00000567406 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
CDR2-206ENST00000567406 MBD1Q9UIS9 605 aaPredicted RBP16.14■□□□□ 0.17
CDR2-206ENST00000567406 A0A1W2PQH9 124 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 LNP1A1A4G5 178 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 GIPC1O14908 333 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 HOXC11O43248 304 aaPredicted RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 ALDH1A2O94788 518 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 RHOBTB3O94955 611 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 KIF20AO95235 890 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 TUBP50607 506 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 KRT85P78386 507 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 CYP2U1Q7Z449 544 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 FAM186BQ8IYM0 893 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 SMYD4Q8IYR2 804 aaPredicted RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 OLIG1Q8TAK6 271 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 TAF4BQ92750 862 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 SEMA4DQ92854 862 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 HNRNPABQ99729 332 aaKnown RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 LSM14BQ9BX40 385 aaKnown RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 FBXO44Q9H4M3 255 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 POLMQ9NP87 494 aaPredicted RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 TLR8Q9NR97 1041 aaKnown RBP16.13■□□□□ 0.17
CDR2-206ENST00000567406 COMMD8Q9NX08 183 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 DEC1Q9P2X7 70 aa16.13■□□□□ 0.17
CDR2-206ENST00000567406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 NEDD8-MDP1E9PL57 170 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 MAP3K13O43283 966 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 KCNK5O95279 499 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 RARGP13631 454 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 P2RY2P41231 377 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 PTGER3P43115 390 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 IRX4P78413 519 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 INCA1Q0VD86 236 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 ADAM9Q13443 819 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 EOGTQ5NDL2 527 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 C10orf76Q5T2E6 689 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 PPP1R26Q5T8A7 1209 aaPredicted RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 EGFLAMQ63HQ2 1017 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 PSAPL1Q6NUJ1 521 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 KRBA2Q6ZNG9 492 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 TOGARAM2Q6ZUX3 1019 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 ZNF513Q8N8E2 541 aaPredicted RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 DDX1Q92499 740 aaKnown RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 OTUB2Q96DC9 234 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 P2RY11Q96G91 374 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 ACOX2Q99424 681 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 NT5C1AQ9BXI3 368 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 FSCN3Q9NQT6 498 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 TMEM74BQ9NUR3 256 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 DNAJC17Q9NVM6 304 aaKnown RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 PLK2Q9NYY3 685 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 SCML2Q9UQR0 700 aa16.12■□□□□ 0.17
CDR2-206ENST00000567406 ATXN2Q99700 1313 aaKnown RBP16.12■□□□□ 0.17
CDR2-206ENST00000567406 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 KHNYNO15037 678 aaKnown RBP16.11■□□□□ 0.17
CDR2-206ENST00000567406 MYL1P05976 194 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 KRT13P13646 458 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 ATP5C1P36542 298 aaKnown RBP16.11■□□□□ 0.17
CDR2-206ENST00000567406 MAP7D1Q3KQU3 841 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 HTR3DQ70Z44 454 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 TERB1Q8NA31 727 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 BBS2Q9BXC9 721 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 FRYQ5TBA9 3013 aa16.11■□□□□ 0.17
CDR2-206ENST00000567406 KMT2BQ9UMN6 2715 aaPredicted RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 PRRT4C9JH25 899 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 CDX4O14627 284 aaPredicted RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 CILPO75339 1184 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 ZNF202O95125 648 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 HMBSP08397 361 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 TYRP14679 529 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 GABRG2P18507 467 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 PSMC2P35998 433 aaKnown RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 C10orf120Q5SQS8 335 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 GRAMD4Q6IC98 578 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 INTS8Q75QN2 995 aaKnown RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 LPCAT2Q7L5N7 544 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
CDR2-206ENST00000567406 ARID3AQ99856 593 aa16.1■□□□□ 0.17
CDR2-206ENST00000567406 IMPG2Q9BZV3 1241 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms