RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CYP2U1Q7Z449 544 aa29.2■■■□□ 2.26
UBFD1-206ENST00000566669 C12orf40Q86WS4 652 aa29.2■■■□□ 2.26
UBFD1-206ENST00000566669 PHTF2Q8N3S3 785 aa29.2■■■□□ 2.26
UBFD1-206ENST00000566669 LSM14BQ9BX40 385 aaKnown RBP29.2■■■□□ 2.26
UBFD1-206ENST00000566669 BCCIPQ9P287 314 aaKnown RBP eCLIP29.2■■■□□ 2.26
UBFD1-206ENST00000566669 STARD13Q9Y3M8 1113 aa29.2■■■□□ 2.26
UBFD1-206ENST00000566669 EPG5Q9HCE0 2579 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 KHNYNO15037 678 aaKnown RBP29.19■■■□□ 2.26
UBFD1-206ENST00000566669 CILPO75339 1184 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 BEST1O76090 585 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 ADORA2BP29275 332 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 P2RY2P41231 377 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 GCLMP48507 274 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 KDSRQ06136 332 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 DAB2IPQ5VWQ8 1189 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 TMEM92Q6UXU6 159 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 LPCAT2Q7L5N7 544 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 TERB1Q8NA31 727 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 CNTNAP3BQ96NU0 1288 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 EDEM2Q9BV94 578 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 KLF16Q9BXK1 252 aaPredicted RBP29.19■■■□□ 2.26
UBFD1-206ENST00000566669 CNTNAP3Q9BZ76 1288 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 MARK1Q9P0L2 795 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 DNMT3LQ9UJW3 386 aa29.19■■■□□ 2.26
UBFD1-206ENST00000566669 CNOT1A5YKK6 2376 aaKnown RBP29.19■■■□□ 2.26
UBFD1-206ENST00000566669 SGK1O00141 431 aa29.18■■■□□ 2.26
UBFD1-206ENST00000566669 CHRM1P11229 460 aaPredicted RBP29.18■■■□□ 2.26
UBFD1-206ENST00000566669 ACO1P21399 889 aaKnown RBP29.18■■■□□ 2.26
UBFD1-206ENST00000566669 PLA2G4AP47712 749 aa29.18■■■□□ 2.26
UBFD1-206ENST00000566669 ZNF513Q8N8E2 541 aaPredicted RBP29.18■■■□□ 2.26
UBFD1-206ENST00000566669 TAS1R2Q8TE23 839 aa29.18■■■□□ 2.26
UBFD1-206ENST00000566669 GTPBP4Q9BZE4 634 aaKnown RBP29.18■■■□□ 2.26
UBFD1-206ENST00000566669 RMND1Q9NWS8 449 aa29.18■■■□□ 2.26
UBFD1-206ENST00000566669 ZNF510Q9Y2H8 683 aa29.18■■■□□ 2.26
UBFD1-206ENST00000566669 MAP3K13O43283 966 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 PPP3CAQ08209 521 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 ORC1Q13415 861 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 GRAMD4Q6IC98 578 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 SDE2Q6IQ49 451 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 CCDC186Q7Z3E2 898 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 TTC30AQ86WT1 665 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 TMEM25Q86YD3 366 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 RXFP3Q9NSD7 469 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 CLIC5Q9NZA1 410 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 ZDHHC9Q9Y397 364 aa29.17■■■□□ 2.26
UBFD1-206ENST00000566669 HHLA1C9JL84 531 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 CACNG3O60359 315 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 ZNF202O95125 648 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 TRIM49P0CI25 452 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 TRIM49CP0CI26 452 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 IRF1P10914 325 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 RALAP11233 206 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 HOXD12P35452 270 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 KIF11P52732 1056 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 SLC8A3P57103 927 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 E2F5Q15329 346 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 ZCWPW2Q504Y3 356 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 ARHGAP18Q8N392 663 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 ELMO3Q96BJ8 720 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 DUSP16Q9BY84 665 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 UBXN6Q9BZV1 441 aa29.16■■■□□ 2.26
UBFD1-206ENST00000566669 APOBEC3GQ9HC16 384 aaKnown RBP29.16■■■□□ 2.26
UBFD1-206ENST00000566669 EVLQ9UI08 416 aaPredicted RBP29.16■■■□□ 2.26
UBFD1-206ENST00000566669 CETN3O15182 167 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 PRR29P0C7W0 189 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 EPB41P11171 864 aaKnown RBP29.15■■■□□ 2.26
UBFD1-206ENST00000566669 NTSR1P30989 418 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 MESP2Q0VG99 397 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 C10orf76Q5T2E6 689 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 NAT16Q8N8M0 369 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 FBXL13Q8NEE6 735 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 TWNKQ96RR1 684 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 BBS2Q9BXC9 721 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 SMOC1Q9H4F8 434 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.15■■■□□ 2.26
UBFD1-206ENST00000566669 MAPK8IP1Q9UQF2 711 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 INVSQ9Y283 1065 aa29.15■■■□□ 2.26
UBFD1-206ENST00000566669 TCRBV21S2A2A0A5A6 115 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 CYP26A1O43174 497 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 GREM1O60565 184 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 ADAM23O75077 832 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 RARGP13631 454 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 CD58P19256 250 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 DHPSP49366 369 aaPredicted RBP29.14■■■□□ 2.26
UBFD1-206ENST00000566669 MXI1P50539 228 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 COG7P83436 770 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 LMAN2Q12907 356 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 EMC10Q5UCC4 262 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 SLC36A4Q6YBV0 504 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 PGBD3Q8N328 593 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 DNAJC17Q9NVM6 304 aaKnown RBP29.14■■■□□ 2.26
UBFD1-206ENST00000566669 ANGPTL2Q9UKU9 493 aa29.14■■■□□ 2.26
UBFD1-206ENST00000566669 LAMA1P25391 3075 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 LNP1A1A4G5 178 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 BCKDHBP21953 392 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 KCNA4P22459 653 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 C10orf120Q5SQS8 335 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 TCEAL6Q6IPX3 200 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 GPRIN1Q7Z2K8 1008 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 SFTPA1Q8IWL2 248 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms