RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 IPMKQ8NFU5 416 aa12□□□□□ -0.49
CDH1-210ENST00000566612 DDX1Q92499 740 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 C18orf25Q96B23 403 aaPredicted RBP12□□□□□ -0.49
CDH1-210ENST00000566612 NSL1Q96IY1 281 aa12□□□□□ -0.49
CDH1-210ENST00000566612 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
CDH1-210ENST00000566612 CPSF2Q9P2I0 782 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 GRID1Q9ULK0 1009 aa12□□□□□ -0.49
CDH1-210ENST00000566612 WDR3Q9UNX4 943 aaKnown RBP eCLIP12□□□□□ -0.49
CDH1-210ENST00000566612 BTAF1O14981 1849 aa12□□□□□ -0.49
CDH1-210ENST00000566612 CASTOR2A6NHX0 329 aa12□□□□□ -0.49
CDH1-210ENST00000566612 C3orf70A6NLC5 250 aaPredicted RBP12□□□□□ -0.49
CDH1-210ENST00000566612 ATP6V1G2O95670 118 aa12□□□□□ -0.49
CDH1-210ENST00000566612 GHRP10912 638 aa12□□□□□ -0.49
CDH1-210ENST00000566612 CCND1P24385 295 aa12□□□□□ -0.49
CDH1-210ENST00000566612 SERPINB9P50453 376 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ACVR2BQ13705 512 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ANKRD22Q5VYY1 191 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ZCCHC23Q6ZST2 131 aa12□□□□□ -0.49
CDH1-210ENST00000566612 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 SLC26A7Q8TE54 656 aa12□□□□□ -0.49
CDH1-210ENST00000566612 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
CDH1-210ENST00000566612 RNF157Q96PX1 679 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ARMCX1Q9P291 453 aa12□□□□□ -0.49
CDH1-210ENST00000566612 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 SLC39A10Q9ULF5 831 aa12□□□□□ -0.49
CDH1-210ENST00000566612 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 SDR42E2A6NKP2 422 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PMM2O15305 246 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 B4GALT4O60513 344 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ATP4AP20648 1035 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PMLP29590 882 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 WNT7BP56706 349 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 USP10Q14694 798 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 SH3PXD2AQ5TCZ1 1133 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 TRABD2AQ86V40 505 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 SGF29Q96ES7 293 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ABHD16BQ9H3Z7 469 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 WDCPQ9H6R7 721 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 MINDY3Q9H8M7 445 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 KRT82Q9NSB4 513 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PPME1Q9Y570 386 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ATP8B3O60423 1300 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ALOX15BO15296 676 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PMPCBO75439 489 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 JCHAINP01591 159 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ECHS1P30084 290 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PNPLA4P41247 253 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 AQP5P55064 265 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 RPL10AP62906 217 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 ELF3P78545 371 aaPredicted RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 COG7P83436 770 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 MTFR1Q15390 333 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 CYP1B1Q16678 543 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 CNPY4Q8N129 248 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PABPC5Q96DU9 382 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 CELF6Q96J87 481 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 SRPK1Q96SB4 655 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 TMEM120AQ9BXJ8 343 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 GOLGA2P5Q9HBQ8 144 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 VTA1Q9NP79 307 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 HMGXB4Q9UGU5 601 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 WDR27A2RRH5 827 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 TPH1P17752 444 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 ABCG1P45844 678 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 SERPINB4P48594 390 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 TSHZ1Q6ZSZ6 1077 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 RAB3IL1Q8TBN0 382 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 PDCD6IPQ8WUM4 868 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 KAT2BQ92831 832 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 VPS39Q96JC1 886 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 C12orf42Q96LP6 360 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 MRPL45Q9BRJ2 306 aaKnown RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 SPON2Q9BUD6 331 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 TASP1Q9H6P5 420 aa11.99□□□□□ -0.49
CDH1-210ENST00000566612 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
CDH1-210ENST00000566612 ATXN3P54252 364 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 YWHAZP63104 245 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 CUL3Q13618 768 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 C16orf46Q6P387 395 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 MTHFD1LQ6UB35 978 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 CRELD2Q6UXH1 353 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 RGS9BPQ6ZS82 235 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 XYLT1Q86Y38 959 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 FRMD8Q9BZ67 464 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 PRG3Q9Y2Y8 225 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 SRRM3A6NNA2 597 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 GOLGA8TH3BQL2 631 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 TGM2P21980 687 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SERPINB3P29508 390 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 PPIL2Q13356 520 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SH2D4BQ5SQS7 431 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 MAP3K21Q5TCX8 1036 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 KIAA1841Q6NSI8 718 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 B3GNT9Q6UX72 402 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 POLNQ7Z5Q5 900 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms