RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 MDM4O15151 490 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 ATMINO43313 823 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 TLR5O60602 858 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 DAB1O75553 588 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 TBX18O95935 607 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 LTFP02788 710 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 DDX6P26196 483 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDH13-208ENST00000566333 WEE1P30291 646 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 GBP2P32456 591 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 SCNN1AP37088 669 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 PPP3CCP48454 512 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 PSEN1P49768 467 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 PITX1P78337 314 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 GFPT1Q06210 699 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 SLC18A3Q16572 532 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 FAM78AQ5JUQ0 283 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ACAD10Q6JQN1 1059 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 MSANTD2Q6P1R3 559 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 OTOP3Q7RTS5 596 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 CMTM8Q8IZV2 173 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ARL14EPQ8N8R7 260 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 MAB21L3Q8N8X9 362 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ZSCAN18Q8TBC5 510 aaPredicted RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 ADAMTS19Q8TE59 1207 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 FGF14Q92915 247 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 MCRS1Q96EZ8 462 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 PDLIM2Q96JY6 352 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 RPGRIP1Q96KN7 1286 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 SLC2A13Q96QE2 648 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
CDH13-208ENST00000566333 ISCUQ9H1K1 167 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 SLITRK6Q9H5Y7 841 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 TRPV4Q9HBA0 871 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 TRPC7Q9HCX4 862 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ADAMTS1Q9UHI8 967 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 NUDT5Q9UKK9 219 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 FAM50BQ9Y247 325 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 TECTAO75443 2155 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 CHD5Q8TDI0 1954 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TRAV19A0A0A6YYK7 116 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SOWAHDA6NJG2 315 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TMCO5BA8MYB1 307 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 GREM1O60565 184 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 HSF2BPO75031 334 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SLC34A2O95436 690 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 GJB6O95452 261 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 IGLV3-25P01717 112 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 CKMP06732 381 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 GZMAP12544 262 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 RARGP13631 454 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 PFKLP17858 780 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TNFAIP3P21580 790 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 RRM1P23921 792 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 FLT3P36888 993 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SLC7A9P82251 487 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SLC6A3Q01959 620 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 MTF1Q14872 753 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZNF77Q15935 545 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ARHGAP15Q53QZ3 475 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 HECTD3Q5T447 861 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 FAM102AQ5T9C2 384 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 SYPL2Q5VXT5 272 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 BSPRYQ5W0U4 402 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 OR6B2Q6IFH4 312 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 KLHDC10Q6PID8 442 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 PARM1Q6UWI2 310 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TOGARAM2Q6ZUX3 1019 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 BEND5Q7L4P6 421 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 TAC4Q86UU9 113 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZDHHC17Q8IUH5 632 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ARID3BQ8IVW6 561 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 MCOLN2Q8IZK6 566 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZDHHC14Q8IZN3 488 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ZNF276Q8N554 614 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 C3orf20Q8ND61 904 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 ST13P5Q8NFI4 369 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 DQX1Q8TE96 717 aaKnown RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 EDEM1Q92611 657 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SMARCD2Q92925 531 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 USP13Q92995 863 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 WBP2Q969T9 261 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 FAM149B1Q96BN6 582 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 C18orf8Q96DM3 657 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 NECAB3Q96P71 396 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 LRRC3BQ96PB8 259 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 CYP2S1Q96SQ9 504 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 PACSIN1Q9BY11 444 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SMOC2Q9H3U7 446 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 SYNCQ9H7C4 482 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 NHEJ1Q9H9Q4 299 aaPredicted RBP8.55□□□□□ -1.04
CDH13-208ENST00000566333 CD320Q9NPF0 282 aa8.55□□□□□ -1.04
CDH13-208ENST00000566333 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms