RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GRIA2P42262 883 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 KIF11P52732 1056 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 CRY1Q16526 586 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 COBLL1Q53SF7 1204 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 ZNF658Q5TYW1 1059 aaPredicted RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 ANO7Q6IWH7 933 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 HTR3DQ70Z44 454 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 TMEM25Q86YD3 366 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 ZC3H3Q8IXZ2 948 aaKnown RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 TXNDC5Q8NBS9 432 aaKnown RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 FBXL13Q8NEE6 735 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 ARID3AQ99856 593 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 DUSP16Q9BY84 665 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 SMOC1Q9H4F8 434 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 ZDHHC4Q9NPG8 344 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 RXFP3Q9NSD7 469 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 RAB20Q9NX57 234 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 NUDT5Q9UKK9 219 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 INVSQ9Y283 1065 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 TNRC6BQ9UPQ9 1833 aaKnown RBP19.31■□□□□ 0.68
USB1-213ENST00000566292 SGK1O00141 431 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 MDM4O15151 490 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 FOXD2O60548 495 aaPredicted RBP19.31■□□□□ 0.68
USB1-213ENST00000566292 RARGP13631 454 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 ATP5C1P36542 298 aaKnown RBP19.31■□□□□ 0.68
USB1-213ENST00000566292 TNFRSF4P43489 277 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 PMS1P54277 932 aaKnown RBP19.31■□□□□ 0.68
USB1-213ENST00000566292 CBWD6Q4V339 395 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 CBWD3Q5JTY5 395 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 CBWD5Q5RIA9 395 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 ANKRD40Q6AI12 368 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 SCD5Q86SK9 330 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 SLC4A11Q8NBS3 891 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 MDGA1Q8NFP4 955 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 SPATA20Q8TB22 786 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 TATDN2Q93075 761 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 FAXDC2Q96IV6 333 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 CNOT6LQ96LI5 555 aaKnown RBP19.31■□□□□ 0.68
USB1-213ENST00000566292 GSDMAQ96QA5 445 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 CISHQ9NSE2 258 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.31■□□□□ 0.68
USB1-213ENST00000566292 PCDHGA5Q9Y5G8 931 aa19.31■□□□□ 0.68
USB1-213ENST00000566292 CNOT1A5YKK6 2376 aaKnown RBP19.3■□□□□ 0.68
USB1-213ENST00000566292 TRIM24O15164 1050 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 ADAM23O75077 832 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 TULP3O75386 442 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 MPLP40238 635 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 RAD23BP54727 409 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 ELF2Q15723 593 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 ANO4Q32M45 955 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 HSF5Q4G112 596 aaPredicted RBP19.3■□□□□ 0.68
USB1-213ENST00000566292 AASDHQ4L235 1098 aaPredicted RBP19.3■□□□□ 0.68
USB1-213ENST00000566292 BTBD8Q5XKL5 378 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 CCDC186Q7Z3E2 898 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 HEXIM2Q96MH2 286 aaKnown RBP19.3■□□□□ 0.68
USB1-213ENST00000566292 USP3Q9Y6I4 520 aa19.3■□□□□ 0.68
USB1-213ENST00000566292 CEP192Q8TEP8 1941 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 LAMA1P25391 3075 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TRIM49BA6NDI0 452 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 GOLGA6L4A6NEF3 574 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
USB1-213ENST00000566292 STX10O60499 249 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 RHOBTB1O94844 696 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 BCKDHBP21953 392 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 BECN1Q14457 450 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 USP39Q53GS9 565 aaKnown RBP19.29■□□□□ 0.68
USB1-213ENST00000566292 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
USB1-213ENST00000566292 TCERG1LQ5VWI1 586 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 KLHDC10Q6PID8 442 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TTC30AQ86WT1 665 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TERB1Q8NA31 727 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 C12orf50Q8NA57 414 aaPredicted RBP19.29■□□□□ 0.68
USB1-213ENST00000566292 OLIG1Q8TAK6 271 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TMEM176AQ96HP8 235 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TSG101Q99816 390 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 DEC1Q9P2X7 70 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 HCN2Q9UL51 889 aa19.29■□□□□ 0.68
USB1-213ENST00000566292 TBC1D3BA6NDS4 549 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 SMC2O95347 1197 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 GBP1P32455 592 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 LIMK1P53667 647 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 NUCB2P80303 420 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 FKBP3Q00688 224 aaKnown RBP19.28■□□□□ 0.68
USB1-213ENST00000566292 EOGTQ5NDL2 527 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 C10orf120Q5SQS8 335 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 PMS2CLQ68D20 193 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 Q6ZNB5 142 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 TTC39CQ8N584 583 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 DNAI2Q9GZS0 605 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 VPS45Q9NRW7 570 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 DNMT3LQ9UJW3 386 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 NAGPAQ9UK23 515 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 LSM7Q9UK45 103 aaKnown RBP19.28■□□□□ 0.68
USB1-213ENST00000566292 COQ4Q9Y3A0 265 aa19.28■□□□□ 0.68
USB1-213ENST00000566292 BCLAF3A2AJT9 711 aaKnown RBP19.27■□□□□ 0.68
USB1-213ENST00000566292 NEDD8-MDP1E9PL57 170 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 ALDH1A2O94788 518 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 PLA2G4AP47712 749 aa19.27■□□□□ 0.68
USB1-213ENST00000566292 PSEN1P49768 467 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms