RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TMEM74BQ9NUR3 256 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 INTS13Q9NVM9 706 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 KCND3Q9UK17 655 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 DERAQ9Y315 318 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 LMTK3Q96Q04 1460 aa5.71□□□□□ -1.5
CNOT1-209ENST00000566240 CCDC196A0A1B0GTZ2 297 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 B4E171 279 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 EXOC5O00471 708 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 LARGE1O95461 756 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 TFRCP02786 760 aaKnown RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 LDHCP07864 332 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 CD19P15391 556 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 PBX1P40424 430 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 TSPAN7P41732 249 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 VAV2P52735 878 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 RBM5P52756 815 aaKnown RBP eCLIP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 NR1H2P55055 460 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 FAM189BP81408 668 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 GALNTL6Q49A17 601 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 RABL3Q5HYI8 236 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 TMEM196Q5HYL7 178 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 PIK3AP1Q6ZUJ8 805 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 BBS12Q6ZW61 710 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 SYT13Q7L8C5 426 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 TBC1D1Q86TI0 1168 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 SYNE4Q8N205 404 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 METTL25Q8N6Q8 603 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 RRP36Q96EU6 259 aaKnown RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 AKIP1Q9NQ31 210 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 PI4KBQ9UBF8 816 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 STEAP1Q9UHE8 339 aa5.7□□□□□ -1.5
CNOT1-209ENST00000566240 FBXO2Q9UK22 296 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 DRG1Q9Y295 367 aaKnown RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 RRP7AQ9Y3A4 280 aaKnown RBP5.7□□□□□ -1.5
CNOT1-209ENST00000566240 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 OTOL1A6NHN0 477 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MARCH11A6NNE9 402 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 NCR1O76036 304 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 WDR47O94967 919 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 VNN1O95497 513 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 ERBB2P04626 1255 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 PDHA1P08559 390 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 CNPP09543 421 aaKnown RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 CAPN3P20807 821 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MAGEA10P43363 369 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 GSTM5P46439 218 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MCM2P49736 904 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 ATXN1P54253 815 aaKnown RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 SF3A3Q12874 501 aaKnown RBP eCLIP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MTAPQ13126 283 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 RESTQ13127 1097 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 ANKRD1Q15327 319 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 HS1BP3Q53T59 392 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 ZNF569Q5MCW4 686 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 DTX2Q86UW9 622 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 SIAH1Q8IUQ4 282 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 TSPYL6Q8N831 410 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 EDAQ92838 391 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MCRS1Q96EZ8 462 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 MECRQ9BV79 373 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 ZNF768Q9H5H4 540 aaKnown RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 CCDC134Q9H6E4 229 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 LIN7CQ9NUP9 197 aaKnown RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 NKX1-2Q9UD57 310 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-209ENST00000566240 NCANO14594 1321 aa5.69□□□□□ -1.5
CNOT1-209ENST00000566240 FAM90A20PA6NIJ5 464 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 CTIFO43310 598 aaKnown RBP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 PRICKLE3O43900 615 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 BAIAP3O94812 1187 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 TMEM225BP0DP42 221 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 PPP3CBP16298 524 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 DRD1P21728 446 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 HNRNPMP52272 730 aaKnown RBP eCLIP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 CTXN3Q4LDR2 81 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 ARMC6Q6NXE6 501 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 MZT2BQ6NZ67 158 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 USP38Q8NB14 1042 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 SUPT20HQ8NEM7 779 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 SLC22A17Q8WUG5 538 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 GLG1Q92896 1179 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 EIF3CQ99613 913 aaKnown RBP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 REEP2Q9BRK0 252 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 GPR63Q9BZJ6 419 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 OSBPL5Q9H0X9 879 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 ABHD16BQ9H3Z7 469 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 PREBQ9HCU5 417 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 ALG13Q9NP73 1137 aaKnown RBP5.68□□□□□ -1.5
CNOT1-209ENST00000566240 TRIM36Q9NQ86 728 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 IRAK4Q9NWZ3 460 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms