RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507		H7C0C1	242 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CELF2	O95319	508 aa	Known RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	ATP5O	P48047	213 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	SERPINB4	P48594	390 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	ARFIP2	P53365	341 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CCDC14	Q49A88	953 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	C4orf50	Q6ZRC1	276 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	TTC17	Q96AE7	1141 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	PPP1R16B	Q96T49	567 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	TMEM120A	Q9BXJ8	343 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	POPDC2	Q9HBU9	364 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	GBA2	Q9HCG7	927 aa	Predicted RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	NMRK2	Q9NPI5	230 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	PAK5	Q9P286	719 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CFAP69	A5D8W1	941 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	KLF11	O14901	512 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	KCNN4	O15554	427 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	PRPSAP2	O60256	369 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CCDC22	O60826	627 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	GRAP2	O75791	330 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	HAUS5	O94927	633 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	MCF2	P10911	925 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CDC25C	P30307	473 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	ABL2	P42684	1182 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	MAGEA6	P43360	314 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	SLC26A2	P50443	739 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	NDST1	P52848	882 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CDK16	Q00536	496 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	CDO1	Q16878	200 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	FAM187B	Q17R55	369 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	RFWD3	Q6PCD5	774 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	LCLAT1	Q6UWP7	414 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	FASTKD5	Q7L8L6	764 aa	Known RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	DPH6	Q7L8W6	267 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	NAF1	Q96HR8	494 aa	Known RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	HPDL	Q96IR7	371 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	SRPK1	Q96SB4	655 aa	Known RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	BTBD10	Q9BSF8	475 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	RNPEP	Q9H4A4	650 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	ASB7	Q9H672	318 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	TSPAN16	Q9UKR8	245 aa		13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	MTO1	Q9Y2Z2	717 aa	Known RBP	13.68	□□□□□ -0.22
SCAPER-215	ENST00000565507	TRIM49D1	C9J1S8	452 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	KIF1C	O43896	1103 aa	Known RBP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	HBP1	O60381	514 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	C22orf31	O95567	290 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	OSBP	P22059	807 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PRKCH	P24723	683 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	RBL1	P28749	1068 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	SLC9A4	Q6AI14	798 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	OR6B2	Q6IFH4	312 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PCDH19	Q8TAB3	1148 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	SMARCAD1	Q9H4L7	1026 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PDZD7	Q9H5P4	517 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	SMYD2	Q9NRG4	433 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	ZNF180	Q9UJW8	692 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	C2orf71	A6NGG8	1288 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	GSC2	O15499	205 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	ADORA2A	P29274	412 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PDK2	Q15119	407 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	TAF11	Q15544	211 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	CA9	Q16790	459 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	HSF5	Q4G112	596 aa	Predicted RBP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	FAXC	Q5TGI0	409 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	CST9	Q5W186	159 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	DSTYK	Q6XUX3	929 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PPM1N	Q8N819	430 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	C12orf29	Q8N999	325 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	CFAP36	Q96G28	342 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	NSL1	Q96IY1	281 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	PCDH18	Q9HCL0	1135 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	GPATCH2L	Q9NWQ4	482 aa		13.67	□□□□□ -0.22
SCAPER-215	ENST00000565507	BCLAF3	A2AJT9	711 aa	Known RBP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	RFPL1	O75677	317 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	TGM2	P21980	687 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	MRPS5	P82675	430 aa	Known RBP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	POU5F1B	Q06416	359 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	KHDC1	Q4VXA5	237 aa	Known RBP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	BOLA3	Q53S33	107 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	CES4A	Q5XG92	561 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	OLFML1	Q6UWY5	402 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	TTC7B	Q86TV6	843 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	USP6NL	Q92738	828 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	TUBB6	Q9BUF5	446 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	PLLP	Q9Y342	182 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	HEY1	Q9Y5J3	304 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	EVPL	Q92817	2033 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507		A0A087WZ62	844 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	SLC15A5	A6NIM6	579 aa		13.66	□□□□□ -0.22
SCAPER-215	ENST00000565507	DPYSL4	O14531	572 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms