RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HARS2P49590 506 aaKnown RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 CHN2P52757 468 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 YTHDF3Q7Z739 585 aaKnown RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 UXS1Q8NBZ7 420 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 TEX13BQ9BXU2 312 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 CLPBQ9H078 707 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 KLHL1Q9NR64 748 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 RPS6KA6Q9UK32 745 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 COQ6Q9Y2Z9 468 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 TPST1O60507 370 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 SCNN1DP51172 638 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 PLIN5Q00G26 463 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 SNRNP48Q6IEG0 339 aaKnown RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 TIGD7Q6NT04 549 aaPredicted RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 ULK3Q6PHR2 472 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 FAM220AQ7Z4H9 259 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 CLVS1Q8IUQ0 354 aaPredicted RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 TMC2Q8TDI7 906 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 GDPD5Q8WTR4 605 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 EEF1AKMT1Q8WVE0 214 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 SKA1Q96BD8 255 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 CCSER1Q9C0I3 900 aa5.24□□□□□ -1.57
SMG1-211ENST00000565324 DDX18Q9NVP1 670 aaKnown RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 RPL26L1Q9UNX3 145 aaKnown RBP5.24□□□□□ -1.57
SMG1-211ENST00000565324 A0A0A6YYK5 440 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 TPBGLP0DKB5 382 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 CHRM3P20309 590 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PTGER2P43116 358 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 ERFP50548 548 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 CSNK2BP67870 215 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TUBA1BP68363 451 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 DLG4P78352 724 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TUBA1AQ71U36 451 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 EIF3MQ7L2H7 374 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 MTDHQ86UE4 582 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 TPCN2Q8NHX9 752 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 MS4A14Q96JA4 679 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 NT5C1AQ9BXI3 368 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 STN1Q9H668 368 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 COPS7BQ9H9Q2 264 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 DRG1Q9Y295 367 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 ERVV-1B6SEH8 477 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 SMIM22K7EJ46 135 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 GNB5O14775 395 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 MAGEB2O15479 319 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 ETFBP38117 255 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 VAC14Q08AM6 782 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 ITGADQ13349 1161 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 LAYNQ6UX15 382 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 FOXP4Q8IVH2 680 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 LRRC71Q8N4P6 559 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 C9orf72Q96LT7 481 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 CLN6Q9NWW5 311 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 CDH9Q9ULB4 789 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 F5H423 210 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 H3BNX3 289 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PPEF1O14829 653 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 UBOX5O94941 541 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 SNX4O95219 450 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 APOC1P02654 83 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 EIF2AK2P19525 551 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 TFE3P19532 575 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 ADSSP30520 456 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 RPL5P46777 297 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 PRKAA1Q13131 559 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 DHFR2Q86XF0 187 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 UTP15Q8TED0 518 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 PROX1Q92786 737 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 REPS1Q96D71 796 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 FAM129BQ96TA1 746 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 EIF2AK1Q9BQI3 630 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 MOV10Q9HCE1 1003 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 CCNB1IP1Q9NPC3 277 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TMEM138Q9NPI0 162 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PCDHA6Q9UN73 950 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 RUVBL2Q9Y230 463 aaKnown RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 NDUFAF1Q9Y375 327 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PCDHA8Q9Y5H6 950 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 SQORQ9Y6N5 450 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PTPRTO14522 1441 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 FLT1P17948 1338 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 LDOC1O95751 146 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 HOXB8P17481 243 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 GPD1P21695 349 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 POU1F1P28069 291 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 HSD17B3P37058 310 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 RPS6KA3P51812 740 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TWF1Q12792 350 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 SLC15A2Q16348 729 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 UBE2SQ16763 222 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 BOLA3Q53S33 107 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TSPAN14Q8NG11 270 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 CLHC1Q8NHS4 586 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 EMILIN2Q9BXX0 1053 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 PIDD1Q9HB75 910 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 FAM217BQ9NTX9 383 aaPredicted RBP5.23□□□□□ -1.57
SMG1-211ENST00000565324 SLC38A7Q9NVC3 462 aa5.23□□□□□ -1.57
SMG1-211ENST00000565324 TSR3Q9UJK0 312 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 317.4 ms