RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 PTK6Q13882 451 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 TFDP2Q14188 446 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 FAM153CQ494X1 144 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 CTXN3Q4LDR2 81 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 PSTKQ8IV42 348 aaKnown RBP20.4■□□□□ 0.86
CLN6-205ENST00000564846 NKD2Q969F2 451 aaPredicted RBP20.4■□□□□ 0.86
CLN6-205ENST00000564846 VWCEQ96DN2 955 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 TRIM62Q9BVG3 475 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 OXCT2Q9BYC2 517 aaPredicted RBP20.4■□□□□ 0.86
CLN6-205ENST00000564846 FAM153AQ9UHL3 310 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 USP3Q9Y6I4 520 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 RRP9O43818 475 aaKnown RBP20.39■□□□□ 0.86
CLN6-205ENST00000564846 DGKIO75912 1065 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 UPP2O95045 317 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 OR4Q2P0C623 313 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 RDXP35241 583 aaKnown RBP20.39■□□□□ 0.86
CLN6-205ENST00000564846 GRIK1P39086 918 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 DPYSL2Q16555 572 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 VSTM1Q6UX27 236 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 HFE2Q6ZVN8 426 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 MREGQ8N565 214 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 FAM118BQ9BPY3 351 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 ZNF670Q9BS34 389 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 NEUROG2Q9H2A3 272 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 PCDH18Q9HCL0 1135 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 GRHL1Q9NZI5 618 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 HCSTQ9UBK5 93 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 DNPEPQ9ULA0 475 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 HPCAL4Q9UM19 191 aa20.39■□□□□ 0.86
CLN6-205ENST00000564846 H7C4K7 107 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 APOC4-APOC2K7ER74 178 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 KIAA0355O15063 1070 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 APOC2P02655 101 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 FYNP06241 537 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 CYP2F1P24903 491 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 ALDH7A1P49419 539 aaKnown RBP20.39■□□□□ 0.85
CLN6-205ENST00000564846 CTCFP49711 727 aaPredicted RBP20.39■□□□□ 0.85
CLN6-205ENST00000564846 VCPP55072 806 aaKnown RBP20.39■□□□□ 0.85
CLN6-205ENST00000564846 DYNLT1P63172 113 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 GPS2Q13227 327 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 ZC3H12AQ5D1E8 599 aaKnown RBP20.39■□□□□ 0.85
CLN6-205ENST00000564846 SYPL2Q5VXT5 272 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 ZNF365Q70YC5 407 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 BHLHA9Q7RTU4 235 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 CCDC89Q8N998 374 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 RNF157Q96PX1 679 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 TMEM106CQ9BVX2 250 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 NAALADL1Q9UQQ1 740 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 NEU2Q9Y3R4 380 aa20.39■□□□□ 0.85
CLN6-205ENST00000564846 MICAL3Q7RTP6 2002 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 M0QYT0 321 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ITGAVP06756 1048 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 NCAM1P13591 858 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 RPL21P46778 160 aaKnown RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 ATXN1P54253 815 aaKnown RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 OASLQ15646 514 aaKnown RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 KCTD19Q17RG1 926 aaPredicted RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 OTUD1Q5VV17 481 aaPredicted RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 BEND5Q7L4P6 421 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 GSTA5Q7RTV2 222 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 KRT222Q8N1A0 295 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 SLC35B2Q8TB61 432 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ACTL9Q8TC94 416 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 CCHCR1Q8TD31 782 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 TOP1MTQ969P6 601 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 HAUS1Q96CS2 278 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 FMO2Q99518 471 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ZDHHC18Q9NUE0 388 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ABI2Q9NYB9 513 aaPredicted RBP20.38■□□□□ 0.85
CLN6-205ENST00000564846 CALCOCO1Q9P1Z2 691 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 WHRNQ9P202 907 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ASIC3Q9UHC3 531 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 AP4E1Q9UPM8 1137 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 ZNF148Q9UQR1 794 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 PCDHB5Q9Y5E4 795 aa20.38■□□□□ 0.85
CLN6-205ENST00000564846 NT5C1B-RDH14C9J2C7 533 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 EFCAB14O75071 495 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 AMHP03971 560 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 IL4RP24394 825 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 OTUD4Q01804 1114 aaKnown RBP20.37■□□□□ 0.85
CLN6-205ENST00000564846 DEUP1Q05D60 604 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 SMARCB1Q12824 385 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 CALCOCO2Q13137 446 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 MMRN1Q13201 1228 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 ANKS3Q6ZW76 656 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 LRRC45Q96CN5 670 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 FAF2Q96CS3 445 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 PGAP3Q96FM1 320 aaPredicted RBP20.37■□□□□ 0.85
CLN6-205ENST00000564846 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 PRDM5Q9NQX1 630 aaPredicted RBP20.37■□□□□ 0.85
CLN6-205ENST00000564846 GPATCH2LQ9NWQ4 482 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 NLRC5Q86WI3 1866 aa20.37■□□□□ 0.85
CLN6-205ENST00000564846 TRIM43BA6NCK2 446 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TNFRSF10BO14763 440 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TRIM66O15016 1216 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 ITIH2P19823 946 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 L1CAMP32004 1257 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 HSPA9P38646 679 aaKnown RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 MAGEA11P43364 429 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms