RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GNL1P36915 607 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 RPL3P39023 403 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 FOXD4Q12950 439 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CNGA2Q16280 664 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 QPCTQ16769 361 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GSTA5Q7RTV2 222 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SRLQ86TD4 932 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TEX9Q8N6V9 391 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TMEM161BQ8NDZ6 487 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZNF560Q96MR9 790 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EMILIN2Q9BXX0 1053 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ABCG8Q9H221 673 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ADNPQ9H2P0 1102 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 RAD18Q9NS91 495 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 RAB20Q9NX57 234 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 KLHL14Q9P2G3 628 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SORCS3Q9UPU3 1222 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 KPNA7A9QM74 516 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 POC1B-GALNT4F8VUJ3 575 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ITGB1P05556 798 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CYP2C9P11712 490 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 VCLP18206 1134 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 STAT5BP51692 787 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CAPZA1P52907 286 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 POU5F1Q01860 360 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 LAMTOR4Q0VGL1 99 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ELAVL2Q12926 359 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPARCL1Q14515 664 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 Q4G0T1 1027 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NUGGCQ68CJ6 796 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 RPS27LQ71UM5 84 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 LRRC49Q8IUZ0 686 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 HAVCR2Q8TDQ0 301 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 USP6NLQ92738 828 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 STRA6Q9BX79 667 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CALN1Q9BXU9 219 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TXLNGQ9NUQ3 528 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CNOT8Q9UFF9 292 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 PSME4Q14997 1843 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MYH10P35580 1976 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 A0A088AWK7 358 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 C19orf81C9J6K1 198 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZNF10P21506 573 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SERPINB3P29508 390 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 VCPP55072 806 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 PTPRNQ16849 979 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 AARS2Q5JTZ9 985 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZDHHC20Q5W0Z9 365 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 AAGABQ6PD74 315 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ARMCX6Q7L4S7 300 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ABI1Q8IZP0 508 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GUF1Q8N442 669 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPATA6LQ8N4H0 392 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 DEPTORQ8TB45 409 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 AUTS2Q8WXX7 1259 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ACOT12Q8WYK0 555 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EDEM1Q92611 657 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 KCNK16Q96T55 309 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MRPL45Q9BRJ2 306 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SUCLA2Q9P2R7 463 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CPNE7Q9UBL6 633 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ADAM21Q9UKJ8 722 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 DSEQ9UL01 958 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ANTXRLA6NF34 631 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 BUD23O43709 281 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 FARP2O94887 1054 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 KITP10721 976 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 HNRNPH3P31942 346 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SLC1A1P43005 524 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCT5P48643 541 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GPR15P49685 360 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 USP11P51784 963 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 PRKAA2P54646 552 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FSCBQ5H9T9 825 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CAPRIN2Q6IMN6 1127 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 KRT80Q6KB66 452 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 PNMA8AQ86V59 439 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CFAP61Q8NHU2 1237 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 N4BP2L2Q92802 583 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZBED3Q96IU2 234 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 PBKQ96KB5 322 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ATXN3LQ9H3M9 355 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 METTL5Q9NRN9 209 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 AGO2Q9UKV8 859 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 ARL2BPQ9Y2Y0 163 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 PCDHA10Q9Y5I2 948 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 DMXL2Q8TDJ6 3036 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ENTPD3O75355 529 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 OSBPP22059 807 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ST13P50502 369 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CLCN2P51788 898 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 OGDHQ02218 1023 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GHRHRQ02643 423 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 DHX34Q14147 1143 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 WHAMMP3Q1A5X7 153 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 INSCQ1MX18 579 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SLC30A9Q6PML9 568 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FRA10AC1Q70Z53 315 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 LINC00523Q86TU6 105 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms