RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 PPM1NQ8N819 430 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 SHCBP1Q8NEM2 672 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 OR6B3Q8NGW1 331 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 TTC17Q96AE7 1141 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 MANSC1Q9H8J5 431 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 ETNK2Q9NVF9 386 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 COL1A2P08123 1366 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 TGM2P21980 687 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 TAF1BQ53T94 588 aaPredicted RBP23.22■■□□□ 1.31
SPSB3-206ENST00000564709 LRRC6Q86X45 466 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 ALKBH8Q96BT7 664 aaKnown RBP23.22■■□□□ 1.31
SPSB3-206ENST00000564709 SLC4A5Q9BY07 1137 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 VTA1Q9NP79 307 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 CXorf49A8MYA2 514 aaPredicted RBP23.22■■□□□ 1.31
SPSB3-206ENST00000564709 CCDC130P13994 396 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 SLC9A4Q6AI14 798 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 CAND1Q86VP6 1230 aaKnown RBP23.22■■□□□ 1.31
SPSB3-206ENST00000564709 GPRC5AQ8NFJ5 357 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 SLC35F5Q8WV83 523 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 APOPT1Q96IL0 206 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 APOL6Q9BWW8 343 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 SETD4Q9NVD3 440 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 KANSL3Q9P2N6 904 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 HESX1Q9UBX0 185 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 GJD2Q9UKL4 321 aa23.22■■□□□ 1.31
SPSB3-206ENST00000564709 T-ENOLP0DO92 83 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 CYP2F1P24903 491 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 ADORA2BP29275 332 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 GBE1Q04446 702 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 SESTD1Q86VW0 696 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 LRMDAQ9H2I8 198 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 CDHR5Q9HBB8 845 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 POPDC2Q9HBU9 364 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 ZC3H7BQ9UGR2 993 aaKnown RBP23.21■■□□□ 1.31
SPSB3-206ENST00000564709 RALGAPA2Q2PPJ7 1873 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 NEK3P51956 506 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 STILQ15468 1287 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 TMEM110Q86TL2 294 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 MTDHQ86UE4 582 aaKnown RBP23.21■■□□□ 1.31
SPSB3-206ENST00000564709 PLCD3Q8N3E9 789 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 TTC39CQ8N584 583 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 TEKT4Q8WW24 435 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 L3MBTL3Q96JM7 780 aaPredicted RBP23.21■■□□□ 1.31
SPSB3-206ENST00000564709 KATNBL1Q9H079 304 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 KLC2Q9H0B6 622 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 DHX35Q9H5Z1 703 aaKnown RBP23.21■■□□□ 1.31
SPSB3-206ENST00000564709 PLAC1Q9HBJ0 212 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 ZFP69BQ9UJL9 534 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 NR2E3Q9Y5X4 410 aa23.21■■□□□ 1.31
SPSB3-206ENST00000564709 LOC102724159A0A0B4J2E5 919 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 A0A0G2JND7 137 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 TRIM49D1C9J1S8 452 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 F5H423 210 aaPredicted RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 UGT1A9O60656 530 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 C1QAP02745 245 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 PDGFRBP09619 1106 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 TROVE2P10155 538 aaKnown RBP eCLIP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 NEFHP12036 1026 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 LCP1P13796 627 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 HOXA11P31270 313 aaPredicted RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 SNAPC2Q13487 334 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 PWP2Q15269 919 aaKnown RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 NT5DC4Q86YG4 428 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 RTP4Q96DX8 246 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 SNX27Q96L92 541 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 VPS11Q9H270 941 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 NRDE2Q9H7Z3 1164 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 UGT1A7Q9HAW7 530 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 UGT1A10Q9HAW8 530 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 UGT1A8Q9HAW9 530 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 SNAI1O95863 264 aaPredicted RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 RPSAP08865 295 aaKnown RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 BGNP21810 368 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 TSSK1BQ9BXA7 367 aa23.2■■□□□ 1.3
SPSB3-206ENST00000564709 NXF3Q9H4D5 531 aaKnown RBP23.2■■□□□ 1.3
SPSB3-206ENST00000564709 BCLAF3A2AJT9 711 aaKnown RBP23.19■■□□□ 1.3
SPSB3-206ENST00000564709 A8MXQ7 604 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 C2CD2LO14523 706 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 METTL18O95568 372 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 MMP3P08254 477 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SMPD1P17405 629 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 ETV4P43268 484 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SLC10A2Q12908 348 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-206ENST00000564709 BMPR2Q13873 1038 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SOWAHAQ2M3V2 549 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 DCAF4L1Q3SXM0 396 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 CDHR3Q6ZTQ4 885 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SH2D5Q6ZV89 423 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 CATSPER4Q7RTX7 472 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SLC7A6OSQ96CW6 309 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-206ENST00000564709 RAB3IPQ96QF0 476 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-206ENST00000564709 ZNF670Q9BS34 389 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 SMYD2Q9NRG4 433 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 MFHAS1Q9Y4C4 1052 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 MDM4O15151 490 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
SPSB3-206ENST00000564709 ANP32DO95626 131 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 AKAP5P24588 427 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 GPATCH11Q8N954 259 aa23.19■■□□□ 1.3
SPSB3-206ENST00000564709 EMID1Q96A84 441 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms