RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FBXO43Q4G163 708 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 TRIM65Q6PJ69 517 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 ZNF276Q8N554 614 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 FAM126AQ9BYI3 521 aaPredicted RBP19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 FBRSL1Q9HCM7 1045 aaKnown RBP19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 ZSCAN32Q9NX65 697 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 LSM7Q9UK45 103 aaKnown RBP19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 FANCMQ8IYD8 2048 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 ATG2BQ96BY7 2078 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 MYOFQ9NZM1 2061 aa19.28■□□□□ 0.68
SYNGR3-204ENST00000564642 GTPBP10A4D1E9 387 aaKnown RBP19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 M0QYV0 167 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 MDM4O15151 490 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 PRKCSHP14314 528 aaPredicted RBP19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 YWHAGP61981 247 aaKnown RBP eCLIP19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 SATB1Q01826 763 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 HSP90AA4PQ58FG1 418 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 NAIF1Q69YI7 327 aaPredicted RBP19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 PM20D1Q6GTS8 502 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 RHBDF2Q6PJF5 856 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 SASS6Q6UVJ0 657 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 HTR3DQ70Z44 454 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 RSRC2Q7L4I2 434 aaKnown RBP19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 BBS7Q8IWZ6 715 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 SIX6OS1Q8N1H7 587 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 KCTD13Q8WZ19 329 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 TUBGCP2Q9BSJ2 902 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 ULBP1Q9BZM6 244 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 RASAL2Q9UJF2 1139 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 CNTN6Q9UQ52 1028 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 PCDHGA2Q9Y5H1 932 aa19.27■□□□□ 0.68
SYNGR3-204ENST00000564642 MBD3O95983 291 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 CALCAP01258 141 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 ADH5P11766 374 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 LCP1P13796 627 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 GAD2Q05329 585 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 ADIGQ0VDE8 80 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 VWA3BQ502W6 1294 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 PKDCCQ504Y2 493 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 LY6G5CQ5SRR4 150 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 BTBD8Q5XKL5 378 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 ASCL5Q7RTU5 278 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 CCDC26Q8TAB7 109 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 SECISBP2LQ93073 1101 aaKnown RBP19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 WBP2Q969T9 261 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 NDST4Q9H3R1 872 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 APEX2Q9UBZ4 518 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 STRIP2Q9ULQ0 834 aa19.26■□□□□ 0.67
SYNGR3-204ENST00000564642 PRR23AA6NEV1 266 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 PES1O00541 588 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 MED7O43513 233 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 RNF40O75150 1001 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 PON1P27169 355 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 USP8P40818 1118 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 OPRD1P41143 372 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 RGS7P49802 495 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 ZNF132P52740 706 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 COG7P83436 770 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 EFEMP1Q12805 493 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 KCNJ12Q14500 433 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 GJB7Q6PEY0 223 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 RBM43Q6ZSC3 357 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 ENOX1Q8TC92 643 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 SLC35F5Q8WV83 523 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 NDRG1Q92597 394 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 ZSWIM1Q9BR11 485 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 CNGB3Q9NQW8 809 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 SPHK2Q9NRA0 654 aa19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 SAMSN1Q9NSI8 373 aaKnown RBP19.25■□□□□ 0.67
SYNGR3-204ENST00000564642 LMNAP02545 664 aaKnown RBP19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 GAB4Q2WGN9 574 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 ANO4Q32M45 955 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 PMF1Q6P1K2 205 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 ZBTB44Q8NCP5 570 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 NELL1Q92832 810 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 HSFY1Q96LI6 401 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 PNKPQ96T60 521 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 OLA1Q9NTK5 396 aaKnown RBP19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 MARCH2Q9P0N8 246 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 SLC8A2Q9UPR5 921 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 NFE2L3Q9Y4A8 694 aa19.24■□□□□ 0.67
SYNGR3-204ENST00000564642 THAP12O43422 761 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 STC2O76061 302 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 LETM1O95202 739 aaPredicted RBP19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 PAPSS2O95340 614 aaPredicted RBP19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 APODP05090 189 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 HMBSP08397 361 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 TDGF1P13385 188 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 GNA15P30679 374 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 EIF2DP41214 584 aaKnown RBP19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 SLC6A11P48066 632 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 APBA1Q02410 837 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 TCP11X2Q5H9J9 407 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 MIIPQ5JXC2 388 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 BSPRYQ5W0U4 402 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 TMEM25Q86YD3 366 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms