RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 VPS50Q96JG6 964 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 VCPIP1Q96JH7 1222 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 EBF3Q9H4W6 596 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 HDAC9Q9UKV0 1011 aa5.18□□□□□ -1.58
CHD9-212ENST00000564641 CBSLP0DN79 551 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 PRF1P14222 555 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 TKTP29401 623 aaKnown RBP5.17□□□□□ -1.58
CHD9-212ENST00000564641 CBSP35520 551 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 CPT1AP50416 773 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 CNN3Q15417 329 aaKnown RBP5.17□□□□□ -1.58
CHD9-212ENST00000564641 NPY5RQ15761 445 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 ZNF750Q32MQ0 723 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 TMTC4Q5T4D3 741 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 ZDHHC17Q8IUH5 632 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 SAMD14Q8IZD0 417 aaPredicted RBP5.17□□□□□ -1.58
CHD9-212ENST00000564641 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
CHD9-212ENST00000564641 PNPLA1Q8N8W4 532 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 HIC2Q96JB3 615 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 LRRC27Q9C0I9 530 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 CPNE7Q9UBL6 633 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 STEAP1Q9UHE8 339 aa5.17□□□□□ -1.58
CHD9-212ENST00000564641 IFT140Q96RY7 1462 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 H7C4K7 107 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 TLR2O60603 784 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 SNX2O60749 519 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 CNOT3O75175 753 aaKnown RBP5.16□□□□□ -1.58
CHD9-212ENST00000564641 PARP1P09874 1014 aaKnown RBP5.16□□□□□ -1.58
CHD9-212ENST00000564641 TPH1P17752 444 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 ACVR2AP27037 513 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 ZNF91Q05481 1191 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 CC2D1BQ5T0F9 858 aaKnown RBP5.16□□□□□ -1.58
CHD9-212ENST00000564641 APOA5Q6Q788 366 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 IRF2BP2Q7Z5L9 587 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 ANKRD13BQ86YJ7 626 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 STK31Q9BXU1 1019 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 POT1Q9NUX5 634 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 STK32BQ9NY57 414 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 LPAR3Q9UBY5 353 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 USP19O94966 1318 aa5.16□□□□□ -1.58
CHD9-212ENST00000564641 RSF1Q96T23 1441 aaPredicted RBP5.15□□□□□ -1.58
CHD9-212ENST00000564641 CLIC1O00299 241 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 PRPF3O43395 683 aaKnown RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 USP12O75317 370 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 TXNP10599 105 aaKnown RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 ZKSCAN1P17029 563 aaPredicted RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 ATF7P17544 494 aaPredicted RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 ADRA1DP25100 572 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 HOXD9P28356 352 aaPredicted RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 TACR3P29371 465 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 CFHR1Q03591 330 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 CLCA4Q14CN2 919 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 MFSD13AQ14CX5 517 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 FAM102BQ5T8I3 360 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 NXNQ6DKJ4 435 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 SWSAP1Q6NVH7 229 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 CRELD2Q6UXH1 353 aaPredicted RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 KCTD20Q7Z5Y7 419 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 SKAP1Q86WV1 359 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 EDC3Q96F86 508 aaKnown RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 ZDHHC12Q96GR4 267 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 WDYHV1Q96HA8 205 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 ZBTB45Q96K62 511 aaPredicted RBP5.15□□□□□ -1.59
CHD9-212ENST00000564641 OGDHLQ9ULD0 1010 aa5.15□□□□□ -1.59
CHD9-212ENST00000564641 FER1L4A9Z1Z3 1794 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 RAB27BO00194 218 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 ADAM10O14672 748 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 CD63P08962 238 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 MYBP10242 640 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 CTSAP10619 480 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 HGFP14210 728 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 RPL17P18621 184 aaKnown RBP5.14□□□□□ -1.59
CHD9-212ENST00000564641 CCKBRP32239 447 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 THBS4P35443 961 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 ME1P48163 572 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 TXNL4AP83876 142 aaKnown RBP5.14□□□□□ -1.59
CHD9-212ENST00000564641 FMO1Q01740 532 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 POLD3Q15054 466 aaPredicted RBP5.14□□□□□ -1.59
CHD9-212ENST00000564641 PFKFB3Q16875 520 aaPredicted RBP5.14□□□□□ -1.59
CHD9-212ENST00000564641 FAM110CQ1W6H9 321 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 SLC9C1Q4G0N8 1177 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 SRGAP1Q7Z6B7 1085 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 PIM3Q86V86 326 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 SDR16C5Q8N3Y7 309 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 FAM71DQ8N9W8 422 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 TRMOQ9BU70 441 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 FOXP1Q9H334 677 aaPredicted RBP5.14□□□□□ -1.59
CHD9-212ENST00000564641 ZNF287Q9HBT7 754 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 DNAJB11Q9UBS4 358 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 DKK4Q9UBT3 224 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 RIMKLBQ9ULI2 386 aa5.14□□□□□ -1.59
CHD9-212ENST00000564641 MGEA5O60502 916 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 HRGP04196 525 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 CCKARP32238 428 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 STK3Q13188 491 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 TRIM71Q2Q1W2 868 aaKnown RBP5.13□□□□□ -1.59
CHD9-212ENST00000564641 ARHGAP29Q52LW3 1261 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 AWAT1Q58HT5 328 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 ARFGAP1Q8N6T3 406 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms