RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FKBP3Q00688 224 aaKnown RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 BYSLQ13895 437 aaKnown RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 AASDHQ4L235 1098 aaPredicted RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 CCDC186Q7Z3E2 898 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 BBS7Q8IWZ6 715 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 ETFBKMTQ8IXQ9 262 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 PHTF2Q8N3S3 785 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 SPATA20Q8TB22 786 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 WHAMMQ8TF30 809 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 TIGD1Q96MW7 591 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 TWNKQ96RR1 684 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 KLF16Q9BXK1 252 aaPredicted RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 POLMQ9NP87 494 aaPredicted RBP15.82■□□□□ 0.12
SPG7-210ENST00000564409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.123e-7■■■■■ 37.3
SPG7-210ENST00000564409 RAB20Q9NX57 234 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 CLIC5Q9NZA1 410 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 DNMT3LQ9UJW3 386 aa15.82■□□□□ 0.12
SPG7-210ENST00000564409 SPTBN2O15020 2390 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 RALAP11233 206 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 CD58P19256 250 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 MPLP40238 635 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 PPP1R2P41236 205 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 PRCPP42785 496 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 SEC13P55735 322 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 SLC8A3P57103 927 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 LRRC63Q05C16 580 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 PNOCQ13519 176 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 ELOA2Q8IYF1 753 aaPredicted RBP15.81■□□□□ 0.12
SPG7-210ENST00000564409 ARHGAP18Q8N392 663 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 IL17RCQ8NAC3 791 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 HEXIM2Q96MH2 286 aaKnown RBP15.81■□□□□ 0.12
SPG7-210ENST00000564409 XPO6Q96QU8 1125 aaKnown RBP15.81■□□□□ 0.12
SPG7-210ENST00000564409 MMRN2Q9H8L6 949 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 GDPD2Q9HCC8 539 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.81■□□□□ 0.12
SPG7-210ENST00000564409 POLR3BQ9NW08 1133 aaPredicted RBP15.81■□□□□ 0.12
SPG7-210ENST00000564409 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 COQ4Q9Y3A0 265 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 USP3Q9Y6I4 520 aa15.81■□□□□ 0.12
SPG7-210ENST00000564409 BCLAF3A2AJT9 711 aaKnown RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 DCDC2BA2VCK2 349 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 TBC1D3BA6NDS4 549 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 CYP26A1O43174 497 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 TULP3O75386 442 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 KLF8O95600 359 aaPredicted RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 YWHAEP62258 255 aaKnown RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 ANO4Q32M45 955 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 SPDYCQ5MJ68 293 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 PPP1R26Q5T8A7 1209 aaPredicted RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 ANO7Q6IWH7 933 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 GPRIN1Q7Z2K8 1008 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 C12orf40Q86WS4 652 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 ZC3H3Q8IXZ2 948 aaKnown RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 CCDC33Q8N5R6 958 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 ALLCQ8N6M5 410 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 TERB1Q8NA31 727 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 TXNDC5Q8NBS9 432 aaKnown RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 ENGASEQ8NFI3 743 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 SMARCE1Q969G3 411 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 TMEM176AQ96HP8 235 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 MARK1Q9P0L2 795 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 STARD13Q9Y3M8 1113 aa15.8■□□□□ 0.12
SPG7-210ENST00000564409 CNOT1A5YKK6 2376 aaKnown RBP15.8■□□□□ 0.12
SPG7-210ENST00000564409 NCOR2Q9Y618 2525 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 SCAMP3O14828 347 aaKnown RBP15.79■□□□□ 0.12
SPG7-210ENST00000564409 CACNG3O60359 315 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 GREM1O60565 184 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 TBX18O95935 607 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 IRF1P10914 325 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 CHRM1P11229 460 aaPredicted RBP15.79■□□□□ 0.12
SPG7-210ENST00000564409 RARGP13631 454 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 GBP1P32455 592 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 TIE1P35590 1138 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 DPP6P42658 865 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 COG7P83436 770 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 KDSRQ06136 332 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 STIM1Q13586 685 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 C10orf120Q5SQS8 335 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 PMS2CLQ68D20 193 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 ARHGAP17Q68EM7 881 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 TMEM25Q86YD3 366 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
SPG7-210ENST00000564409 MDGA1Q8NFP4 955 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 OLIG1Q8TAK6 271 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 SEMA4DQ92854 862 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 SPACA7Q96KW9 195 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 DCLK3Q9C098 648 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 METTL14Q9HCE5 456 aaKnown RBP15.79■□□□□ 0.12
SPG7-210ENST00000564409 OSER1Q9NX31 292 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 NAGPAQ9UK23 515 aa15.79■□□□□ 0.12
SPG7-210ENST00000564409 A0A1W2PQH9 124 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 SGK1O00141 431 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 PSMA7O14818 248 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 GDF9O60383 454 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 CAVIN2O95810 425 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 PI4KAP42356 2102 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 PGFP49763 221 aa15.78■□□□□ 0.12
SPG7-210ENST00000564409 RAD23BP54727 409 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms