RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 ANO7Q6IWH7 933 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 TMEM25Q86YD3 366 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 CCDC33Q8N5R6 958 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 TERB1Q8NA31 727 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 TXNDC5Q8NBS9 432 aaKnown RBP17.65■□□□□ 0.42
CCNF-203ENST00000564236 SPATA20Q8TB22 786 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 DUSP16Q9BY84 665 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 DNAI2Q9GZS0 605 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCNF-203ENST00000564236 DEC1Q9P2X7 70 aa17.65■□□□□ 0.42
CCNF-203ENST00000564236 CYP26A1O43174 497 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 KLF8O95600 359 aaPredicted RBP17.64■□□□□ 0.41
CCNF-203ENST00000564236 CAVIN2O95810 425 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 TBX18O95935 607 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 ADORA2BP29275 332 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 P2RY2P41231 377 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 CCDC6Q16204 474 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 SPDYCQ5MJ68 293 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 STPG1Q5TH74 334 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 IL31Q6EBC2 164 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 Q6ZNB5 142 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 TRMT11Q7Z4G4 463 aaKnown RBP17.64■□□□□ 0.41
CCNF-203ENST00000564236 FMR1NBQ8N0W7 255 aaPredicted RBP17.64■□□□□ 0.41
CCNF-203ENST00000564236 CCDC150Q8NCX0 1101 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 FBXL13Q8NEE6 735 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 NACA2Q9H009 215 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 POLMQ9NP87 494 aaPredicted RBP17.64■□□□□ 0.41
CCNF-203ENST00000564236 CLIC5Q9NZA1 410 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 COQ4Q9Y3A0 265 aa17.64■□□□□ 0.41
CCNF-203ENST00000564236 SPAG17Q6Q759 2223 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 STX10O60499 249 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 ACO1P21399 889 aaKnown RBP17.63■□□□□ 0.41
CCNF-203ENST00000564236 TIE1P35590 1138 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 PLA2G4AP47712 749 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 MXI1P50539 228 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 GOLGA8FQ08AF8 430 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 GOLGA8DPQ0D2H9 430 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 PPP1R26Q5T8A7 1209 aaPredicted RBP17.63■□□□□ 0.41
CCNF-203ENST00000564236 EMC10Q5UCC4 262 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 NUDT18Q6ZVK8 323 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 SCD5Q86SK9 330 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 SEMA4DQ92854 862 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 GSDMAQ96QA5 445 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 CDK5RAP1Q96SZ6 601 aaKnown RBP17.63■□□□□ 0.41
CCNF-203ENST00000564236 TPSD1Q9BZJ3 242 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 NMUR1Q9HB89 426 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 CD248Q9HCU0 757 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 RAB20Q9NX57 234 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 WDR35Q9P2L0 1181 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 HCN2Q9UL51 889 aa17.63■□□□□ 0.41
CCNF-203ENST00000564236 A0A1W2PQH9 124 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 TBC1D3BA6NDS4 549 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 SLC16A3O15427 465 aaKnown RBP17.62■□□□□ 0.41
CCNF-203ENST00000564236 BCKDHBP21953 392 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 CREB5Q02930 508 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 KDSRQ06136 332 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 RAB41Q5JT25 222 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 ARHGAP17Q68EM7 881 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 TADA2BQ86TJ2 420 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 LSM14BQ9BX40 385 aaKnown RBP17.62■□□□□ 0.41
CCNF-203ENST00000564236 GTPBP4Q9BZE4 634 aaKnown RBP17.62■□□□□ 0.41
CCNF-203ENST00000564236 SMOC1Q9H4F8 434 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 CISHQ9NSE2 258 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 RMND1Q9NWS8 449 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 LSM7Q9UK45 103 aaKnown RBP17.62■□□□□ 0.41
CCNF-203ENST00000564236 FBXO10Q9UK96 956 aa17.62■□□□□ 0.41
CCNF-203ENST00000564236 SPTBN2O15020 2390 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 ATG2BQ96BY7 2078 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 LNP1A1A4G5 178 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 CETN3O15182 167 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 IRF1P10914 325 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 EPB41P11171 864 aaKnown RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 RARGP13631 454 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 CD58P19256 250 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 GBP1P32455 592 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 RAD23BP54727 409 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 BYSLQ13895 437 aaKnown RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 MAP7D1Q3KQU3 841 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 ZNF658Q5TYW1 1059 aaPredicted RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 PEAR1Q5VY43 1037 aaPredicted RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 SMYD4Q8IYR2 804 aaPredicted RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 ZNF513Q8N8E2 541 aaPredicted RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 NAT16Q8N8M0 369 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 SLC4A11Q8NBS3 891 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 ENGASEQ8NFI3 743 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 TMEM176AQ96HP8 235 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 XPO6Q96QU8 1125 aaKnown RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
CCNF-203ENST00000564236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.61■□□□□ 0.419e-12■■■■■ 149.1
CCNF-203ENST00000564236 EVLQ9UI08 416 aaPredicted RBP17.61■□□□□ 0.41
CCNF-203ENST00000564236 STC2O76061 302 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 TYRP14679 529 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 PRCPP42785 496 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 ANO4Q32M45 955 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 C10orf76Q5T2E6 689 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 GRAMD4Q6IC98 578 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 TCEAL6Q6IPX3 200 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms