RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 HSFY1Q96LI6 401 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 NAT10Q9H0A0 1025 aaKnown RBP14.07□□□□□ -0.16
CLK3-213ENST00000563842 NMUR1Q9HB89 426 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 OLA1Q9NTK5 396 aaKnown RBP14.07□□□□□ -0.16
CLK3-213ENST00000563842 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
CLK3-213ENST00000563842 OTOL1A6NHN0 477 aaPredicted RBP14.06□□□□□ -0.16
CLK3-213ENST00000563842 BRD2P25440 801 aaKnown RBP14.06□□□□□ -0.16
CLK3-213ENST00000563842 GNA15P30679 374 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 USP8P40818 1118 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 ACADSBP45954 432 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 CCR3P51677 355 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLK3-213ENST00000563842 MYL5Q02045 173 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 ADIGQ0VDE8 80 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 ZNF528Q3MIS6 628 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 FBXO43Q4G163 708 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 PREPLQ4J6C6 727 aaPredicted RBP14.06□□□□□ -0.16
CLK3-213ENST00000563842 TMEM196Q5HYL7 178 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 HTR3DQ70Z44 454 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 RSRC2Q7L4I2 434 aaKnown RBP14.06□□□□□ -0.16
CLK3-213ENST00000563842 SCD5Q86SK9 330 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 SPEM1Q8N4L4 309 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 SLC35F5Q8WV83 523 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 CD101Q93033 1021 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 KLF16Q9BXK1 252 aaPredicted RBP14.06□□□□□ -0.16
CLK3-213ENST00000563842 ULBP1Q9BZM6 244 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 OSER1Q9NX31 292 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 ZNF510Q9Y2H8 683 aa14.06□□□□□ -0.16
CLK3-213ENST00000563842 TULP2O00295 520 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 THAP12O43422 761 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 ATG13O75143 517 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 FBXO21O94952 628 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
CLK3-213ENST00000563842 TBX18O95935 607 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 IRF1P10914 325 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 PGFP49763 221 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 GALK1P51570 392 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 NRLP54845 237 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 BPIFB4P59827 614 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 GAD2Q05329 585 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 PTK2Q05397 1052 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 MTAPQ13126 283 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 CCINQ13939 588 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 DHCR24Q15392 516 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 CDKAL1Q5VV42 579 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 RNF139Q8WU17 664 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 ZNF606Q8WXB4 792 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 IRGQQ8WZA9 623 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 SHC3Q92529 594 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
CLK3-213ENST00000563842 FAM126AQ9BYI3 521 aaPredicted RBP14.05□□□□□ -0.16
CLK3-213ENST00000563842 DCLK3Q9C098 648 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 SEMA4AQ9H3S1 761 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 ABCC13Q9NSE7 274 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 TMEM63CQ9P1W3 806 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
CLK3-213ENST00000563842 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 CYP17A1P05093 508 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 SP9P0CG40 484 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 ADH5P11766 374 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 LCP1P13796 627 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 EIF2DP41214 584 aaKnown RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 NBL1P41271 181 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 CXCL12P48061 93 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 CSTF1Q05048 431 aaKnown RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 TYRO3Q06418 890 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 PMF1Q6P1K2 205 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 C11orf57Q6ZUT1 292 aaPredicted RBP14.04□□□□□ -0.16
CLK3-213ENST00000563842 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 ZSWIM1Q9BR11 485 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 FANCLQ9NW38 375 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 MARCH2Q9P0N8 246 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 RASAL2Q9UJF2 1139 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 DAAM1Q9Y4D1 1078 aa14.04□□□□□ -0.16
CLK3-213ENST00000563842 PROB1E7EW31 1015 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 GPD2P43304 727 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 RGS7P49802 495 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 SNX16P57768 344 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 DAOAP59103 153 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 EFEMP1Q12805 493 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 KRT31Q15323 416 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 LY6G5CQ5SRR4 150 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 FSTL4Q6MZW2 842 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 RHBDF2Q6PJF5 856 aa14.03□□□□□ -0.16
CLK3-213ENST00000563842 MIB1Q86YT6 1006 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms