RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
TRADD-203ENST00000563348 TADA2BQ86TJ2 420 aa20■□□□□ 0.79
TRADD-203ENST00000563348 ARHGAP18Q8N392 663 aa20■□□□□ 0.79
TRADD-203ENST00000563348 RBBP8NLQ8NC74 664 aaPredicted RBP20■□□□□ 0.79
TRADD-203ENST00000563348 CDK5RAP1Q96SZ6 601 aaKnown RBP20■□□□□ 0.79
TRADD-203ENST00000563348 ZSWIM1Q9BR11 485 aa20■□□□□ 0.79
TRADD-203ENST00000563348 CRACR2AQ9BSW2 395 aa20■□□□□ 0.79
TRADD-203ENST00000563348 THAP9Q9H5L6 903 aa20■□□□□ 0.79
TRADD-203ENST00000563348 LRRC4Q9HBW1 653 aa20■□□□□ 0.79
TRADD-203ENST00000563348 UBE2TQ9NPD8 197 aaPredicted RBP20■□□□□ 0.79
TRADD-203ENST00000563348 C2orf42Q9NWW7 574 aa20■□□□□ 0.79
TRADD-203ENST00000563348 NUDT5Q9UKK9 219 aa20■□□□□ 0.79
TRADD-203ENST00000563348 CNTN6Q9UQ52 1028 aa20■□□□□ 0.79
TRADD-203ENST00000563348 CHURC1-FNTBB4DL54 471 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 LILRB5O75023 590 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 ATG13O75143 517 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 ZBED1O96006 694 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 ADH1CP00326 375 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 SETSIPP0DME0 302 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 IRF1P10914 325 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 STILQ15468 1287 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 C10orf120Q5SQS8 335 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 LY6G5CQ5SRR4 150 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 BBS7Q8IWZ6 715 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 GPT2Q8TD30 523 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 KCTD13Q8WZ19 329 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 EZH1Q92800 747 aaPredicted RBP19.99■□□□□ 0.79
TRADD-203ENST00000563348 ULBP1Q9BZM6 244 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 ATG2BQ96BY7 2078 aa19.99■□□□□ 0.79
TRADD-203ENST00000563348 FANCMQ8IYD8 2048 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 GTPBP10A4D1E9 387 aaKnown RBP19.98■□□□□ 0.79
TRADD-203ENST00000563348 K7ESF4 209 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 MDM4O15151 490 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 RNF40O75150 1001 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 HOXA6P31267 233 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 MTIF2P46199 727 aaKnown RBP19.98■□□□□ 0.79
TRADD-203ENST00000563348 GOLGA8FQ08AF8 430 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 GOLGA8DPQ0D2H9 430 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 PKN3Q6P5Z2 889 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 GBP6Q6ZN66 633 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 ENOSF1Q7L5Y1 443 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 FAM114A1Q8IWE2 563 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 SLC35F5Q8WV83 523 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 FAM81BQ96LP2 452 aa19.98■□□□□ 0.79
TRADD-203ENST00000563348 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.98■□□□□ 0.79
TRADD-203ENST00000563348 GOLGA6L22H0YM25 854 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 ADH5P11766 374 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 SLC9A1P19634 815 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 BRD2P25440 801 aaKnown RBP19.97■□□□□ 0.79
TRADD-203ENST00000563348 EIF2DP41214 584 aaKnown RBP19.97■□□□□ 0.79
TRADD-203ENST00000563348 SLC6A11P48066 632 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 YWHAGP61981 247 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRADD-203ENST00000563348 GAD2Q05329 585 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 EXOC3L4Q17RC7 722 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 TRIM65Q6PJ69 517 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 SUMF1Q8NBK3 374 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 CCDC26Q8TAB7 109 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 NDRG1Q92597 394 aaKnown RBP19.97■□□□□ 0.79
TRADD-203ENST00000563348 LSM7Q9UK45 103 aaKnown RBP19.97■□□□□ 0.79
TRADD-203ENST00000563348 MYOFQ9NZM1 2061 aa19.97■□□□□ 0.79
TRADD-203ENST00000563348 ZNF292O60281 2723 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 CALCAP01258 141 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 MFAP3P55082 362 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 COG7P83436 770 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 MAN2A1Q16706 1144 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 PMF1Q6P1K2 205 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 RBM43Q6ZSC3 357 aaKnown RBP19.96■□□□□ 0.79
TRADD-203ENST00000563348 BHLHA9Q7RTU4 235 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 TMEM25Q86YD3 366 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 SCML4Q8N228 414 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 PNKPQ96T60 521 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 SPHK2Q9NRA0 654 aa19.96■□□□□ 0.79
TRADD-203ENST00000563348 A0A0A0MRY4 1105 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 K7EQS6 105 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 HOXC11O43248 304 aaPredicted RBP19.95■□□□□ 0.78
TRADD-203ENST00000563348 GABBR2O75899 941 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 KRT5P13647 590 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 PON1P27169 355 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 FNTBP49356 437 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 DMWDQ09019 674 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 ADIGQ0VDE8 80 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 EFEMP1Q12805 493 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 GJB7Q6PEY0 223 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 Q6ZNB5 142 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 MIB1Q86YT6 1006 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 SIX6OS1Q8N1H7 587 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 SECISBP2LQ93073 1101 aaKnown RBP19.95■□□□□ 0.78
TRADD-203ENST00000563348 HSFY1Q96LI6 401 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 CNGB3Q9NQW8 809 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 APEX2Q9UBZ4 518 aa19.95■□□□□ 0.78
TRADD-203ENST00000563348 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.94■□□□□ 0.78
TRADD-203ENST00000563348 M0QYV0 167 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 STC2O76061 302 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 RGS7P49802 495 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 VWA3BQ502W6 1294 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 BSPRYQ5W0U4 402 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 BTBD8Q5XKL5 378 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 SMYD5Q6GMV2 418 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 RSRC2Q7L4I2 434 aaKnown RBP19.94■□□□□ 0.78
TRADD-203ENST00000563348 LONP2Q86WA8 852 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms