RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 USTQ9Y2C2 406 aa14.55□□□□□ -0.08
CLK3-209ENST00000562670 EFR3BQ9Y2G0 817 aa14.55□□□□□ -0.08
CLK3-209ENST00000562670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 CTAGE15A4D2H0 777 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CAPN9O14815 690 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 PRPSAP2O60256 369 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 TADA3O75528 432 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 SEC24AO95486 1093 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 TRUB2O95900 331 aaKnown RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 F9P00740 461 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CNPP09543 421 aaKnown RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 ZDHHC11BP0C7U3 371 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CTAGE8P0CG41 777 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CSH1P0DML2 217 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CSH2P0DML3 217 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 DNAJB2P25686 324 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 IL1R2P27930 398 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 GPR15P49685 360 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 SULT1E1P49888 294 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 DNA2P51530 1060 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 YWHAGP61981 247 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLK3-209ENST00000562670 NNTQ13423 1086 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 TAZQ16635 292 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 DCAF6Q58WW2 860 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 SNX30Q5VWJ9 437 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 FAM109BQ6ICB4 259 aaPredicted RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 LILRA6Q6PI73 481 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CTAGE6Q86UF2 777 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CTAGE4Q8IX94 777 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 RCOR2Q8IZ40 523 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 MRPL43Q8N983 215 aaKnown RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 PDZD8Q8NEN9 1154 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CMASQ8NFW8 434 aaPredicted RBP14.54□□□□□ -0.08
CLK3-209ENST00000562670 FAM71BQ8TC56 605 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 POF1BQ8WVV4 589 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 NTAN1Q96AB6 310 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 CARD6Q9BX69 1037 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 SMOC2Q9H3U7 446 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 ENTPD7Q9NQZ7 604 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
CLK3-209ENST00000562670 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 SLC38A8A6NNN8 435 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 H3BNC9 293 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 PDE2AO00408 941 aaPredicted RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 CEP104O60308 925 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 ARHGEF15O94989 841 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLK3-209ENST00000562670 CXCL14O95715 111 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 PYGMP11217 842 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 NCAM1P13591 858 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 TCF4P15884 667 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 ELF1P32519 619 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 CETN2P41208 172 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 ALDH1A3P47895 512 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 USP46P62068 366 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 ATP11AP98196 1134 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 SCAPQ12770 1279 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 EIF4EBP2Q13542 120 aaPredicted RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 VEPH1Q14D04 833 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 DAB2IPQ5VWQ8 1189 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 CCDC149Q6ZUS6 474 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 SCD5Q86SK9 330 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 MAIP1Q8WWC4 291 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 AUTS2Q8WXX7 1259 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 NDRG1Q92597 394 aaKnown RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 FBXO32Q969P5 355 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 CAPZA3Q96KX2 299 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 KLHL5Q96PQ7 755 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 SLITRK1Q96PX8 696 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 PEBP4Q96S96 227 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 CDK5RAP1Q96SZ6 601 aaKnown RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 ADAM33Q9BZ11 813 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 LMAN2LQ9H0V9 348 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 CYP4F11Q9HBI6 524 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 TLR8Q9NR97 1041 aaKnown RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 OLA1Q9NTK5 396 aaKnown RBP14.53□□□□□ -0.08
CLK3-209ENST00000562670 ASB3Q9Y575 518 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
CLK3-209ENST00000562670 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 CCDC188H7C350 402 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 CTIFO43310 598 aaKnown RBP14.52□□□□□ -0.09
CLK3-209ENST00000562670 TGM5O43548 720 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 KRT1P04264 644 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 MYOGP15173 224 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 SSR1P43307 286 aaKnown RBP14.52□□□□□ -0.09
CLK3-209ENST00000562670 PPP3CCP48454 512 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 TUBP50607 506 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 ARSEP51690 589 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 CDR1P51861 262 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 ERVFC1P60507 584 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 PDK2Q15119 407 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 DPYSL2Q16555 572 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 CDO1Q16878 200 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 SH3PXD2AQ5TCZ1 1133 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 SDHAF4Q5VUM1 108 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 SYPL2Q5VXT5 272 aa14.52□□□□□ -0.09
CLK3-209ENST00000562670 BTBD8Q5XKL5 378 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms