RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 ARNTL2Q8WYA1 636 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 CENPIQ92674 756 aaPredicted RBP20.42■□□□□ 0.86
IRF9-215ENST00000561415 ALG3Q92685 438 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 FBXO32Q969P5 355 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 NPY6RQ99463 290 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 ADAM33Q9BZ11 813 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 EHD2Q9NZN4 543 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 STAP1Q9ULZ2 295 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 NAALADL1Q9UQQ1 740 aa20.42■□□□□ 0.86
IRF9-215ENST00000561415 KCNK3O14649 394 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 C1RP00736 705 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 NCAM1P13591 858 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TCF4P15884 667 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CLCN4P51793 760 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TUBB2AQ13885 445 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CDO1Q16878 200 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 LRRC38Q5VT99 294 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 ARHGAP18Q8N392 663 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 NCAPGQ9BPX3 1015 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TUBB2BQ9BVA1 445 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 NMUR1Q9HB89 426 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 ABCC13Q9NSE7 274 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 RRN3Q9NYV6 651 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 MRFAP1Q9Y605 127 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SRGAP2O75044 1071 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SPATA31D3P0C874 917 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CSH1P0DML2 217 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CSH2P0DML3 217 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TFE3P19532 575 aaPredicted RBP20.41■□□□□ 0.86
IRF9-215ENST00000561415 CXCR5P32302 372 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SSR1P43307 286 aaKnown RBP20.41■□□□□ 0.86
IRF9-215ENST00000561415 PGFP49763 221 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SMAD3P84022 425 aaKnown RBP20.41■□□□□ 0.86
IRF9-215ENST00000561415 SLC25A11Q02978 314 aaKnown RBP20.41■□□□□ 0.86
IRF9-215ENST00000561415 TWF1Q12792 350 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TAF10Q12962 218 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 PLD1Q13393 1074 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 VEPH1Q14D04 833 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 OTUD1Q5VV17 481 aaPredicted RBP20.41■□□□□ 0.86
IRF9-215ENST00000561415 CHRDL2Q6WN34 429 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SPATA31D4Q6ZUB0 917 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CCDC149Q6ZUS6 474 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 STRADAQ7RTN6 431 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 BNIPLQ7Z465 357 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SLC7A14Q8TBB6 771 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 COG1Q8WTW3 980 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 MYRFLQ96LU7 910 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 TBCBQ99426 244 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 LMAN2LQ9H0V9 348 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CARD9Q9H257 536 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 L2HGDHQ9H9P8 463 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 GMIPQ9P107 970 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 CDC23Q9UJX2 597 aa20.41■□□□□ 0.86
IRF9-215ENST00000561415 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.41■□□□□ 0.86
IRF9-215ENST00000561415 A0A1W2PQH9 124 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 CES2O00748 559 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 HMGA1P17096 107 aaKnown RBP20.4■□□□□ 0.86
IRF9-215ENST00000561415 MIPP30301 263 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 PSEN1P49768 467 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 SULT1E1P49888 294 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 HDAC4P56524 1084 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 DCAF12L1Q5VU92 463 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 BTBD8Q5XKL5 378 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 POLNQ7Z5Q5 900 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 KREMEN2Q8NCW0 462 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 EDEM1Q92611 657 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 TIFAQ96CG3 184 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 TRMT2BQ96GJ1 504 aaKnown RBP20.4■□□□□ 0.86
IRF9-215ENST00000561415 SLITRK1Q96PX8 696 aa20.4■□□□□ 0.86
IRF9-215ENST00000561415 EPHB3P54753 998 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 PITX1P78337 314 aaPredicted RBP20.39■□□□□ 0.86
IRF9-215ENST00000561415 HADHQ16836 314 aaKnown RBP20.39■□□□□ 0.86
IRF9-215ENST00000561415 RAB6CQ53S08 254 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 GDPD5Q8WTR4 605 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 RAB6CQ9H0N0 254 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 TLR8Q9NR97 1041 aaKnown RBP20.39■□□□□ 0.86
IRF9-215ENST00000561415 OSER1Q9NX31 292 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 CLIC5Q9NZA1 410 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 CALCOCO1Q9P1Z2 691 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 USP18Q9UMW8 372 aa20.39■□□□□ 0.86
IRF9-215ENST00000561415 MAGED2Q9UNF1 606 aaPredicted RBP20.39■□□□□ 0.86
IRF9-215ENST00000561415 EPOPA6NHQ4 379 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 ZNF185O15231 689 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 ENDOD1O94919 500 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 C8AP07357 584 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 ZDHHC11BP0C7U3 371 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 IL1R2P27930 398 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 RWDD2BP57060 319 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 RTL10Q7L3V2 364 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 OVCA2Q8WZ82 227 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 PSMG2Q969U7 264 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 PGAP3Q96FM1 320 aaPredicted RBP20.39■□□□□ 0.85
IRF9-215ENST00000561415 PBKQ96KB5 322 aa20.39■□□□□ 0.85
IRF9-215ENST00000561415 MYO9BQ13459 2157 aa20.38■□□□□ 0.85
IRF9-215ENST00000561415 M0QYT0 321 aa20.38■□□□□ 0.85
IRF9-215ENST00000561415 CLASP2O75122 1294 aaKnown RBP20.38■□□□□ 0.85
IRF9-215ENST00000561415 KRT7P08729 469 aa20.38■□□□□ 0.85
IRF9-215ENST00000561415 TXNRD3NBQ6F5E7 133 aa20.38■□□□□ 0.85
IRF9-215ENST00000561415 CYP4V2Q6ZWL3 525 aaPredicted RBP20.38■□□□□ 0.85
IRF9-215ENST00000561415 CREG2Q8IUH2 290 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms