RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SFXN1Q9H9B4 322 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SPG21Q9NZD8 308 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SQORQ9Y6N5 450 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 NLRC5Q86WI3 1866 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 MYH1P12882 1939 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 MYO18BQ8IUG5 2567 aa4.34□□□□□ -1.72
HERC1-211ENST00000560983 CFAP46Q8IYW2 2715 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 TTC3P53804 2025 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CCDC66A2RUB6 948 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 C4orf47A7E2U8 309 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 J3QKU1 62 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 GSTA4O15217 222 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CDC14BO60729 498 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 STK10O94804 968 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 GGPS1O95749 300 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 FAM153BP0C7A2 387 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CTSAP10619 480 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ACRV1P26436 265 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 NOVP48745 357 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 FNTBP49356 437 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CLCN4P51793 760 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 RARSP54136 660 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 RRADP55042 308 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 GUCY1A3Q02108 690 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 PTH1RQ03431 593 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 SCAPQ12770 1279 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 PCOLCEQ15113 449 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CRY1Q16526 586 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 MTERF2Q49AM1 385 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZC3H12BQ5HYM0 836 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 TAF2Q6P1X5 1199 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 PARM1Q6UWI2 310 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 AMOTL1Q8IY63 956 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 BCL6BQ8N143 479 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 IL17DQ8TAD2 202 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZNF707Q96C28 371 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZBTB10Q96DT7 871 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZNF558Q96NG5 402 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 RMDN3Q96TC7 470 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CDC6Q99741 560 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CELF4Q9BZC1 486 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZBP1Q9H171 429 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 OR10A5Q9H207 317 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 OR10A2Q9H208 303 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ZNF703Q9H7S9 590 aaPredicted RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 IL17RBQ9NRM6 502 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 RGS18Q9NS28 235 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 CATSPERZQ9NTU4 200 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 SIRPGQ9P1W8 387 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ISY1Q9ULR0 285 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 MRPS23Q9Y3D9 190 aaKnown RBP4.33□□□□□ -1.72
HERC1-211ENST00000560983 PCDHA9Q9Y5H5 950 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 SLC4A4Q9Y6R1 1079 aa4.33□□□□□ -1.72
HERC1-211ENST00000560983 ANKRD17O75179 2603 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 ASXL3Q9C0F0 2248 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 IGSF9BQ9UPX0 1349 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 DNHD1Q96M86 4753 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CCDC195A0A1B0GUA6 201 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 PRAMEF25A6NGN4 478 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 GSG1L2A8MUP6 293 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 NT5C1B-RDH14C9J2C7 533 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 K7ESF4 209 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 NCAM2O15394 837 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CRTAMO95727 393 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TGFB3P10600 412 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CSRP1P21291 193 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 IBSPP21815 317 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 UBA1P22314 1058 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 ADD2P35612 726 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 PPM1AP35813 382 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 MRPS6P82932 125 aaKnown RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 CD83Q01151 205 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TFAP4Q01664 338 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 SATB1Q01826 763 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ADCY1Q08828 1119 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 FOXL1Q12952 345 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TTF1Q15361 905 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 TMEM266Q2M3C6 531 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 NRN1LQ496H8 165 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CCDC184Q52MB2 194 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CRB2Q5IJ48 1285 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TCEAL6Q6IPX3 200 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 SLC24A5Q71RS6 500 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 LONP2Q86WA8 852 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TMEM173Q86WV6 379 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 GPR135Q8IZ08 494 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 VPS52Q8N1B4 723 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ZNF808Q8N4W9 903 aaPredicted RBP4.32□□□□□ -1.72
HERC1-211ENST00000560983 ASB15Q8WXK1 588 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 STAMQ92783 540 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TCEAL3Q969E4 200 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 ADAM2Q99965 735 aa4.32□□□□□ -1.72
HERC1-211ENST00000560983 TMEM117Q9H0C3 514 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms