RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 CAND1Q86VP6 1230 aaKnown RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 VSIG1Q86XK7 387 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TEKT4Q8WW24 435 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 UTP4Q969X6 686 aaKnown RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TRIM56Q9BRZ2 755 aaKnown RBP15.19■□□□□ 0.02
CRTC3-210ENST00000560927 L3MBTL1Q9Y468 752 aa15.19■□□□□ 0.02
CRTC3-210ENST00000560927 TM9SF1O15321 606 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 LPXNO60711 386 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 APRTP07741 180 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 CCDC130P13994 396 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 EPHX2P34913 555 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SKIV2L2P42285 1042 aaKnown RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 CCNA1P78396 465 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 GBE1Q04446 702 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 ZBTB6Q15916 424 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 DCAF4L1Q3SXM0 396 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 C9orf131Q5VYM1 1079 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SESTD1Q86VW0 696 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 AGAP11Q8TF27 550 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 FAM124BQ9H5Z6 455 aaPredicted RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 ETNK2Q9NVF9 386 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 HAO1Q9UJM8 370 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 TTLL3Q9Y4R7 772 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 PLXNB2O15031 1838 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 CXorf49A8MYA2 514 aaPredicted RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 MDM4O15151 490 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 INHBAP08476 426 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 PDGFRBP09619 1106 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 PYGBP11216 843 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 ALADP13716 330 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 AKAP5P24588 427 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 CYP2F1P24903 491 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 ADORA2BP29275 332 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SLC8A1P32418 973 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SLC10A2Q12908 348 aaPredicted RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 SLC27A1Q6PCB7 646 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 CATSPER4Q7RTX7 472 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 ALKBH8Q96BT7 664 aaKnown RBP15.18■□□□□ 0.02
CRTC3-210ENST00000560927 OSMRQ99650 979 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 APOL6Q9BWW8 343 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 NRDE2Q9H7Z3 1164 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 IKBKGQ9Y6K9 419 aa15.18■□□□□ 0.02
CRTC3-210ENST00000560927 IQANK1A0A1B0GTG1 560 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 BCLAF3A2AJT9 711 aaKnown RBP15.17■□□□□ 0.02
CRTC3-210ENST00000560927 A8MXQ7 604 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 GPR32O75388 356 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 T-ENOLP0DO92 83 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 LMO2P25791 158 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 ETV4P43268 484 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 NEK3P51956 506 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF618Q5T7W0 954 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 USP50Q70EL3 339 aaPredicted RBP15.17■□□□□ 0.02
CRTC3-210ENST00000560927 LRRC6Q86X45 466 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 OR6J1Q8NGC5 347 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 RFWD2Q8NHY2 731 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 USP6NLQ92738 828 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 FAM111AQ96PZ2 611 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 TBCBQ99426 244 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 MANSC1Q9H8J5 431 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 PLEKHA5Q9HAU0 1116 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 TXLNGQ9NUQ3 528 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 DCTN4Q9UJW0 460 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 BTBD19C9JJ37 291 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 METTL18O95568 372 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 LCP1P13796 627 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 L1CAMP32004 1257 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 DUSP28Q4G0W2 176 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 C9orf57Q5W0N0 161 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 ZNF449Q6P9G9 518 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 DPP9Q86TI2 863 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 CTAGE3PQ8IX95 158 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 STAMBPL1Q96FJ0 436 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 C11orf84Q9BUA3 381 aaPredicted RBP15.17■□□□□ 0.02
CRTC3-210ENST00000560927 VPS11Q9H270 941 aa15.17■□□□□ 0.02
CRTC3-210ENST00000560927 DHX35Q9H5Z1 703 aaKnown RBP15.17■□□□□ 0.02
CRTC3-210ENST00000560927 ZC3H7BQ9UGR2 993 aaKnown RBP15.17■□□□□ 0.02
CRTC3-210ENST00000560927 SPTLC1O15269 473 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 UGT1A9O60656 530 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 DCTN3O75935 186 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 RECQL4O94761 1208 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 CBX6O95503 412 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 SETSIPP0DME0 302 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ALDH3A1P30838 453 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 CDHR3Q6ZTQ4 885 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 NLRP9Q7RTR0 991 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 KBTBD7Q8WVZ9 684 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 APOPT1Q96IL0 206 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 MAML3Q96JK9 1138 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 KLC2Q9H0B6 622 aa15.16■□□□□ 0.02
CRTC3-210ENST00000560927 UGT1A7Q9HAW7 530 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms