RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PTDSS1P48651 473 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CLCN2P51788 898 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 OCRLQ01968 901 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 GSTM4Q03013 218 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 IKBKEQ14164 716 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PTK2BQ14289 1009 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT31Q15323 416 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 UAP1Q16222 522 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 IMMTQ16891 758 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 NOL9Q5SY16 702 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 POMZP3Q6PJE2 187 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CNSTQ6PJW8 725 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 AACSQ86V21 672 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC34Q8IZ02 419 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CFAP61Q8NHU2 1237 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 IRGQQ8WZA9 623 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF333Q96JL9 665 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 NTPCRQ9BSD7 190 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 NSRP1Q9H0G5 558 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC134Q9H6E4 229 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF277Q9NRM2 450 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PGPEP1Q9NXJ5 209 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 NSMCE4AQ9NXX6 385 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 RNF14Q9UBS8 474 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 DUSP10Q9Y6W6 482 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 COL16A1Q07092 1604 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 DISP2A7MBM2 1401 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A0J9YVX5 310 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 GOLGA8CPA6NN73 597 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 A8MV72 311 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 AQP7O14520 342 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PTP4A3O75365 173 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 OAS1P00973 400 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CTSBP07858 339 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 ITGA2BP08514 1039 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 TROVE2P10155 538 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■□□□□ 9.2
TSPAN3-209ENST00000560715 CCNB1P14635 433 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 HOXB1P14653 301 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PDE6AP16499 860 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 GGT5P36269 586 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CCT6AP40227 531 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 MAP2K6P52564 334 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SMAD3P84022 425 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 MUM1Q2TAK8 710 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC44A4Q53GD3 710 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 DUS1LQ6P1R4 473 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 WDR59Q6PJI9 974 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 RRAGAQ7L523 313 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 OVCH1Q7RTY7 1134 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 UBE3DQ7Z6J8 389 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 GALNT7Q86SF2 657 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 NOSTRINQ8IVI9 506 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 EFHBQ8N7U6 833 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CEP70Q8NHQ1 597 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PIGOQ8TEQ8 1089 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 GATA6Q92908 595 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 APIPQ96GX9 242 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 DHTKD1Q96HY7 919 aaPredicted RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SPATA17Q96L03 361 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 CATSPER2Q96P56 530 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 C7orf25Q9BPX7 421 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SEMA6BQ9H3T3 888 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 IPPKQ9H8X2 491 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 INIPQ9NRY2 104 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 BTG4Q9NY30 223 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 TMOD3Q9NYL9 352 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 SMARCAL1Q9NZC9 954 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 MSRAQ9UJ68 235 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 PCDHB12Q9Y5F1 795 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 MROH7Q68CQ1 1323 aa7.04□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A1W2PPL8 197 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SIGLEC16A6NMB1 481 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 PODXLO00592 558 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 NVLO15381 856 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CHGBP05060 677 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 MMEP08473 750 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SPATA31D3P0C874 917 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SERPINF1P36955 418 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 RFX5P48382 616 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 PIP4K2AP48426 406 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TBCEQ15813 527 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 PARP6Q2NL67 630 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CFAP221Q4G0U5 840 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 EPHA10Q5JZY3 1008 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ESRP1Q6NXG1 681 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TATDN1Q6P1N9 297 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SPATA31D4Q6ZUB0 917 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 STOX1Q6ZVD7 989 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC9B2Q86UD5 537 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 MDM1Q8TC05 714 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CTNNBL1Q8WYA6 563 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 WNT2BQ93097 391 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TLCD1Q96CP7 247 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ORAI3Q9BRQ5 295 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms