RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ENTPD4Q9Y227 616 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 PCDHGA8Q9Y5G5 932 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 KCNMB2Q9Y691 235 aa6.99□□□□□ -1.29
HERC1-208ENST00000560462 MYH9P35579 1960 aaKnown RBP6.99□□□□□ -1.29
HERC1-208ENST00000560462 TMEM131Q92545 1883 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 A0A1W2PNU3 283 aaPredicted RBP6.98□□□□□ -1.29
HERC1-208ENST00000560462 TMEM150BA6NC51 233 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 BTBD18B2RXH4 712 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 OPA1O60313 960 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 VNN2O95498 520 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 LDLRP01130 860 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 GSTT1P30711 240 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 EIF2DP41214 584 aaKnown RBP6.98□□□□□ -1.29
HERC1-208ENST00000560462 SLC6A11P48066 632 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 RELBQ01201 579 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 FAM160A1Q05DH4 1040 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 KDSRQ06136 332 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 KLRB1Q12918 225 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 VEPH1Q14D04 833 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 TGIF1Q15583 401 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 ZNF77Q15935 545 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 UGCGQ16739 394 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 PRAMEF14Q5SWL7 426 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 CXXC5Q7LFL8 322 aaKnown RBP6.98□□□□□ -1.29
HERC1-208ENST00000560462 NIPA1Q7RTP0 329 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 PLA2G4DQ86XP0 818 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 RNF149Q8NC42 400 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
HERC1-208ENST00000560462 PSPC1Q8WXF1 523 aaKnown RBP6.98□□□□□ -1.29
HERC1-208ENST00000560462 UROC1Q96N76 676 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 ZNF577Q9BSK1 485 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 LINC00597Q9H2U6 94 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 SUV39H2Q9H5I1 410 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 CD248Q9HCU0 757 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
HERC1-208ENST00000560462 INO80B-WBP1J3KQ70 363 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 TBX3O15119 743 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 YKT6O15498 198 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 WIPF1O43516 503 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 NOBOXO60393 691 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 SOAT2O75908 522 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 TNFSF15O95150 251 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 C4BPAP04003 597 aaKnown RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 THEGLP0DJG4 465 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 EPB42P16452 691 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 ARF4P18085 180 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 NMT1P30419 496 aaKnown RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 SLC19A1P41440 591 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 C21orf59P57076 290 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 LAMTOR4Q0VGL1 99 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 RESTQ13127 1097 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 TRIP4Q15650 581 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 TAF12Q16514 161 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 XKR3Q5GH77 459 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 TXNDC8Q6A555 127 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 FOXR1Q6PIV2 292 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 BTLAQ7Z6A9 289 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 CDR2LQ86X02 465 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 RRP36Q96EU6 259 aaKnown RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 PRR11Q96HE9 360 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 CXCL16Q9H2A7 254 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
HERC1-208ENST00000560462 USP36Q9P275 1121 aaKnown RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 SEC63Q9UGP8 760 aaKnown RBP6.97□□□□□ -1.29
HERC1-208ENST00000560462 SDK2Q58EX2 2172 aa6.96□□□□□ -1.29
HERC1-208ENST00000560462 TBC1D3BA6NDS4 549 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 TMEM200CA6NKL6 621 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 CYP17A1P05093 508 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 RLBP1P12271 317 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 EPHA8P29322 1005 aaPredicted RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 OXTRP30559 389 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 SLC6A4P31645 630 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 SLFN5Q08AF3 891 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 SHBQ15464 509 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 ISXQ2M1V0 245 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 MANEAQ5SRI9 462 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 CENPPQ6IPU0 288 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 C14orf80Q86SX3 495 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 MON1AQ86VX9 555 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 CHPFQ8IZ52 775 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 TTC9BQ8N6N2 239 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 APPL2Q8NEU8 664 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 TCTN2Q96GX1 697 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 ATXN7L3BQ96GX2 97 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 ACE2Q9BYF1 805 aaPredicted RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 ABCG4Q9H172 646 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 PCED1AQ9H1Q7 454 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 ITM2CQ9NQX7 267 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 DISC1Q9NRI5 854 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 SEPT10Q9P0V9 454 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms