RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 KIAA1549LQ6ZVL6 1849 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
TPM1-223ENST00000560445 GNA14O95837 355 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 BCAT1P54687 386 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 COG7P83436 770 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 ZXDBP98169 803 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 ANO4Q32M45 955 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 C2orf27AQ580R0 203 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 C10orf120Q5SQS8 335 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 LY6G5CQ5SRR4 150 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 ARHGAP17Q68EM7 881 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 SDE2Q6IQ49 451 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 RHBDF2Q6PJF5 856 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 PRR23CQ6ZRP0 262 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 ZC3H3Q8IXZ2 948 aaKnown RBP14.83□□□□□ -0.04
TPM1-223ENST00000560445 ENGASEQ8NFI3 743 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 JAKMIP2Q96AA8 810 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
TPM1-223ENST00000560445 CNOT6LQ96LI5 555 aaKnown RBP14.83□□□□□ -0.04
TPM1-223ENST00000560445 NAGPAQ9UK23 515 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
TPM1-223ENST00000560445 COQ4Q9Y3A0 265 aa14.83□□□□□ -0.04
TPM1-223ENST00000560445 A0A0A0MRY4 1105 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 TBC1D3BA6NDS4 549 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 K7EQS6 105 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 P4HA2O15460 535 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 CYP26A1O43174 497 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 IRF1P10914 325 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 RARGP13631 454 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 KIF11P52732 1056 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 CUL2Q13617 745 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 CCDC40Q4G0X9 1142 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 GRAMD4Q6IC98 578 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 PKN3Q6P5Z2 889 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
TPM1-223ENST00000560445 ANKRD52Q8NB46 1076 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 WHAMMQ8TF30 809 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 TWNKQ96RR1 684 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 VPS45Q9NRW7 570 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
TPM1-223ENST00000560445 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■□□ 15.3
TPM1-223ENST00000560445 MARK1Q9P0L2 795 aa14.82□□□□□ -0.04
TPM1-223ENST00000560445 PMM2O15305 246 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 BEST1O76090 585 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 GBP1P32455 592 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 CHKAP35790 457 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 SEC13P55735 322 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 SRSF5Q13243 272 aaKnown RBP14.81□□□□□ -0.04
TPM1-223ENST00000560445 STILQ15468 1287 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 CRY1Q16526 586 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 AASDHQ4L235 1098 aaPredicted RBP14.81□□□□□ -0.04
TPM1-223ENST00000560445 ZNF394Q53GI3 561 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 SGO2Q562F6 1265 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 PPP1R26Q5T8A7 1209 aaPredicted RBP14.81□□□□□ -0.04
TPM1-223ENST00000560445 ANKRD40Q6AI12 368 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 IL31Q6EBC2 164 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 BBS7Q8IWZ6 715 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 NT5C1BQ96P26 610 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 KLF16Q9BXK1 252 aaPredicted RBP14.81□□□□□ -0.04
TPM1-223ENST00000560445 LRRC4Q9HBW1 653 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 C2orf42Q9NWW7 574 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
TPM1-223ENST00000560445 USP3Q9Y6I4 520 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 ATG2BQ96BY7 2078 aa14.81□□□□□ -0.04
TPM1-223ENST00000560445 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 HHLA1C9JL84 531 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 SLC30A4O14863 429 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 CACNG3O60359 315 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 TULP3O75386 442 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 KLF8O95600 359 aaPredicted RBP14.8□□□□□ -0.04
TPM1-223ENST00000560445 CYBBP04839 570 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 ZNF806P0C7X5 589 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 SETSIPP0DME0 302 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 PXNP49023 591 aaPredicted RBP14.8□□□□□ -0.04
TPM1-223ENST00000560445 LIMK1P53667 647 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 RAD23BP54727 409 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 ZNF445P59923 1031 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 KDSRQ06136 332 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
TPM1-223ENST00000560445 GAB4Q2WGN9 574 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 PLK5Q496M5 336 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 C10orf76Q5T2E6 689 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 ANO7Q6IWH7 933 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 SIX6OS1Q8N1H7 587 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 TERB1Q8NA31 727 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 SEMA4DQ92854 862 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 SLC35C1Q96A29 364 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 ELMO3Q96BJ8 720 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 EEF2KMTQ96G04 330 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 IPO9Q96P70 1041 aaKnown RBP14.8□□□□□ -0.04
TPM1-223ENST00000560445 BBS2Q9BXC9 721 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 PARD6AQ9NPB6 346 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
TPM1-223ENST00000560445 DMXL1Q9Y485 3027 aa14.8□□□□□ -0.04
TPM1-223ENST00000560445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 NEDD8-MDP1E9PL57 170 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 XPO1O14980 1071 aaKnown RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 NPC1O15118 1278 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms