RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 F8VP50 259 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 LILRB5O75023 590 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 PHACTR2O75167 634 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 GRIK1P39086 918 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 ZXDBP98169 803 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 CDK17Q00537 523 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 GFPT1Q06210 699 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 BIRC3Q13489 604 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 CCINQ13939 588 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 TEX35Q5T0J7 233 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 C1orf228Q6PIY5 440 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 Q6ZS52 159 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 SV2AQ7L0J3 742 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 B3GALNT2Q8NCR0 500 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 IER2Q9BTL4 223 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 TTLL2Q9BWV7 592 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 B3GNT5Q9BYG0 378 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF518BQ9C0D4 1074 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 EBF3Q9H4W6 596 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 KIF9Q9HAQ2 790 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 THG1LQ9NWX6 298 aaKnown RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 FRMD4BQ9Y2L6 1034 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 PCDHGA2Q9Y5H1 932 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 OTOGLQ3ZCN5 2332 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 A8MXQ7 604 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 CLDN5O00501 218 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 HNRNPH3P31942 346 aaKnown RBP9.62□□□□□ -0.87
IDH3A-217ENST00000559889 RAP1GAPP47736 663 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 NOP14P78316 857 aaKnown RBP9.62□□□□□ -0.87
IDH3A-217ENST00000559889 RUNX3Q13761 415 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 PON2Q15165 354 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 NFIL3Q16649 462 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF699Q32M78 642 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ITPRIPL2Q3MIP1 535 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 DENND5BQ6ZUT9 1274 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 PAQR9Q6ZVX9 377 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
IDH3A-217ENST00000559889 C8orf48Q96LL4 319 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 EPC1Q9H2F5 836 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 C2orf42Q9NWW7 574 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ZSCAN32Q9NX65 697 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 PTPRDP23468 1912 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 TRIM66O15016 1216 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 SLC16A3O15427 465 aaKnown RBP9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ARSAP15289 507 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 VAV2P52735 878 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 SATB1Q01826 763 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF77Q15935 545 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 EDEM3Q9BZQ6 932 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 TRPC7Q9HCX4 862 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 CDC23Q9UJX2 597 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
IDH3A-217ENST00000559889 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF840PA6NDX5 716 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 MAPK13O15264 365 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ASS1P00966 412 aaKnown RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 PON1P27169 355 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 HOXC13P31276 330 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 KLHL30Q0D2K2 578 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 USP4Q13107 963 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SGSM1Q2NKQ1 1148 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF667Q5HYK9 610 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 FBXO38Q6PIJ6 1188 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SPEM1Q8N4L4 309 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 KCNK16Q96T55 309 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ELOVL4Q9GZR5 314 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 NUCKS1Q9H1E3 243 aaKnown RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SERPING1P05155 500 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 CKMP06732 381 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 TRIM49P0CI25 452 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 TRIM49CP0CI26 452 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 UCHL3P15374 230 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 TCF3P15923 654 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 HDCP19113 662 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ANXA13P27216 316 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 MAGEA1P43355 309 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 ASPAP45381 313 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 CCR3P51677 355 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 VAMP7P51809 220 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 PPP3CAQ08209 521 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 LRRC32Q14392 662 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 TMEM196Q5HYL7 178 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 NAIF1Q69YI7 327 aaPredicted RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SPOPLQ6IQ16 392 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 EHBP1Q8NDI1 1231 aa9.61□□□□□ -0.87
IDH3A-217ENST00000559889 SECISBP2LQ93073 1101 aaKnown RBP9.61□□□□□ -0.87
IDH3A-217ENST00000559889 FAM126AQ9BYI3 521 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms