RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 EDC3Q96F86 508 aaKnown RBP4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 KAZALD1Q96I82 304 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZC3H10Q96K80 434 aaKnown RBP4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 C8orf48Q96LL4 319 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 CCDC17Q96LX7 622 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 FAM227BQ96M60 508 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 EFHD1Q9BUP0 239 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 SARGQ9BW04 601 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 PRSS22Q9GZN4 317 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 SNX15Q9NRS6 342 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 KLHL13Q9P2N7 655 aa4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 NKX1-2Q9UD57 310 aaPredicted RBP4.9□□□□□ -1.63
CTDSPL2-207ENST00000559738 CYP2D7A0A087X1C5 515 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 POM121BA6NF01 834 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 H3BNC9 293 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 FOXN3O00409 490 aaPredicted RBP4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 APAF1O14727 1248 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 BCAR3O75815 825 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 RBL1P28749 1068 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 MTAPQ13126 283 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 SEC23BQ15437 767 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 ETFDHQ16134 617 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 COBLL1Q53SF7 1204 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 C11orf87Q6NUJ2 197 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 MZT2AQ6P582 158 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 KRT28Q7Z3Y7 464 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 LIX1LQ8IVB5 337 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 IQCDQ96DY2 449 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 NRIP3Q9NQ35 241 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 GJB4Q9NTQ9 266 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 GAR1Q9NY12 217 aaKnown RBP4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 STEAP1Q9UHE8 339 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 SCAF8Q9UPN6 1271 aaKnown RBP4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 COL15A1P39059 1388 aa4.89□□□□□ -1.63
CTDSPL2-207ENST00000559738 KCNU1A8MYU2 1149 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 FCHO1O14526 889 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 THAP12O43422 761 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 CA12O43570 354 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 SNX2O60749 519 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 CD19P15391 556 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 PHKG2P15735 406 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 ATICP31939 592 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 PRIM2P49643 509 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 CFHR3Q02985 330 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 CLCA4Q14CN2 919 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 DENND2CQ68D51 928 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 MIS18BP1Q6P0N0 1132 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 TMEM65Q6PI78 240 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZNF813Q6ZN06 617 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 DCDC5Q6ZRR9 648 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 C12orf76Q8N812 135 aaPredicted RBP4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 PNPLA1Q8N8W4 532 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 MBD3L2Q8NHZ7 208 aaPredicted RBP4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 PRR11Q96HE9 360 aaPredicted RBP4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 SLC25A32Q9H2D1 315 aa4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
CTDSPL2-207ENST00000559738 SETD1BQ9UPS6 1966 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 CLCA1A8K7I4 914 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 TMEM232C9JQI7 657 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 AREL1O15033 823 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 PMM2O15305 246 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 PRAMEF2O60811 474 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 TOP3BO95985 862 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 ARP10275 920 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 TRIM27P14373 513 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 FGFR2P21802 821 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 ATP5F1P24539 256 aaPredicted RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 ADRA1DP25100 572 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 YY1P25490 414 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 GPC5P78333 572 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 KCNB1Q14721 858 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 ST3GAL2Q16842 350 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 MEX3CQ5U5Q3 659 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 CRTC1Q6UUV9 634 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 CNGA4Q8IV77 575 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZNF366Q8N895 744 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 SUN3Q8TAQ9 357 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 RPL36ALQ969Q0 106 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 LRRC46Q96FV0 321 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 TBCBQ99426 244 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 NAA15Q9BXJ9 866 aaKnown RBP4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 MYO1AQ9UBC5 1043 aa4.87□□□□□ -1.63
CTDSPL2-207ENST00000559738 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 CLIC1O00299 241 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 KIF3BO15066 747 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 KCNQ3O43525 872 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 CBFA2T3O75081 653 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 WDR47O94967 919 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 STT3AP46977 705 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 SLC14A1Q13336 389 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 ZNF268Q14587 947 aaPredicted RBP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 ACOX1Q15067 660 aa4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 SAFBQ15424 915 aaKnown RBP eCLIP4.86□□□□□ -1.63
CTDSPL2-207ENST00000559738 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms