RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 SLC24A2Q9UI40 661 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 HEY1Q9Y5J3 304 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 H0YHG0 523 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 APOL1O14791 398 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 PRPF4O43172 522 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPG11-217ENST00000559511 ASMTLO95671 621 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 PGK1P00558 417 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 LCP1P13796 627 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 GNL1P36915 607 aaPredicted RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 FLT3LGP49771 235 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 RNASELQ05823 741 aaKnown RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 BST2Q10589 180 aaKnown RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 XKR4Q5GH76 650 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 ZDHHC17Q8IUH5 632 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 PDIK1LQ8N165 341 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 ANKRD52Q8NB46 1076 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 FBF1Q8TES7 1133 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 TBCBQ99426 244 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
SPG11-217ENST00000559511 ACSS3Q9H6R3 686 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 ABCF3Q9NUQ8 709 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 GDAP2Q9NXN4 497 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 GRID1Q9ULK0 1009 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 BRCA2P51587 3418 aa11.51□□□□□ -0.57
SPG11-217ENST00000559511 MDM4O15151 490 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 KCNN4O15554 427 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 KPNA6O60684 536 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 CD4P01730 458 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 GHRP10912 638 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 KCNE1P15382 129 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 TAC1P20366 129 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 TGM2P21980 687 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 RBL1P28749 1068 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PHBP35232 272 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 RPA3P35244 121 aaPredicted RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 BCAT1P54687 386 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 CAP1Q01518 475 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 TRIM32Q13049 653 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 RASA2Q15283 850 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 TRPM8Q7Z2W7 1104 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 CRYBG2Q8N1P7 616 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 AGGF1Q8N302 714 aaeCLIP11.5□□□□□ -0.57
SPG11-217ENST00000559511 SMG8Q8ND04 991 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 FAF2Q96CS3 445 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 SGSM3Q96HU1 749 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 SMC6Q96SB8 1091 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PAFAH2Q99487 392 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PAIP2Q9BPZ3 127 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 DHRS4Q9BTZ2 278 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 UPF3AQ9H1J1 476 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 PPCSQ9HAB8 311 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 USP15Q9Y4E8 981 aaPredicted RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 IPPQ9Y573 584 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 SMAPO00193 183 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 AVILO75366 819 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 TKTP29401 623 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 ELK3P41970 407 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PTPN9P43378 593 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 RPL34P49207 117 aaKnown RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 BCAR1P56945 870 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 SLC26A9Q7LBE3 791 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 FAM228AQ86W67 206 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 PALM2Q8IXS6 379 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 APPL2Q8NEU8 664 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 CENPIQ92674 756 aaPredicted RBP11.5□□□□□ -0.57
SPG11-217ENST00000559511 RTP4Q96DX8 246 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 ZNF560Q96MR9 790 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 ZNF670Q9BS34 389 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 SNX25Q9H3E2 840 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 RAB6BQ9NRW1 208 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 FETUBQ9UGM5 382 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 GTF2IRD1Q9UHL9 959 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 GGT7Q9UJ14 662 aa11.5□□□□□ -0.57
SPG11-217ENST00000559511 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 CHADO15335 359 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 TYROBPO43914 113 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 IGFBP6P24592 240 aaPredicted RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 CYP2F1P24903 491 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 L1CAMP32004 1257 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 TAF6P49848 677 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 SLC18A1P54219 525 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 SNX16P57768 344 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 MRPS6P82932 125 aaKnown RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 IL9RQ01113 521 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms