RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
SPG11-215ENST00000559193 RFPL1O75677 317 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 KRT36O76013 467 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 ZBED1O96006 694 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 ACADSP16219 412 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 MAGEA6P43360 314 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 NDST1P52848 882 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 BMPR2Q13873 1038 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 RCN1Q15293 331 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 HSF5Q4G112 596 aaPredicted RBP17.23■□□□□ 0.35
SPG11-215ENST00000559193 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
SPG11-215ENST00000559193 ILDR2Q71H61 639 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 HPDLQ96IR7 371 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 FGD4Q96M96 766 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 FRMD8Q9BZ67 464 aaPredicted RBP17.23■□□□□ 0.35
SPG11-215ENST00000559193 PCDH18Q9HCL0 1135 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 TSPAN16Q9UKR8 245 aa17.23■□□□□ 0.35
SPG11-215ENST00000559193 APOL1O14791 398 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 CSH1P0DML2 217 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 CSH2P0DML3 217 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 RARBP10826 455 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 ESRRAP11474 423 aaPredicted RBP17.22■□□□□ 0.35
SPG11-215ENST00000559193 TGM2P21980 687 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 SESN3P58005 492 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 BST1Q10588 318 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 CA9Q16790 459 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 PCDH19Q8TAB3 1148 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 WDR60Q8WVS4 1066 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 IFT122Q9HBG6 1241 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
SPG11-215ENST00000559193 NMRK1Q9NWW6 199 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 ZFATQ9P243 1243 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 BARX2Q9UMQ3 279 aaPredicted RBP17.22■□□□□ 0.35
SPG11-215ENST00000559193 BCLAF3A2AJT9 711 aaKnown RBP17.22■□□□□ 0.35
SPG11-215ENST00000559193 FZD9O00144 591 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 APRTP07741 180 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 BCAR1P56945 870 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 INCA1Q0VD86 236 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 PDK2Q15119 407 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 SLC9A4Q6AI14 798 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 SCYL2Q6P3W7 929 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 LCLAT1Q6UWP7 414 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 ARMC2Q8NEN0 867 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 CFAP61Q8NHU2 1237 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 MCUR1Q96AQ8 359 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 SPATA33Q96N06 139 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 C7orf26Q96N11 449 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 TRIM56Q9BRZ2 755 aaKnown RBP17.22■□□□□ 0.35
SPG11-215ENST00000559193 KLC2Q9H0B6 622 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 STOML1Q9UBI4 398 aa17.22■□□□□ 0.35
SPG11-215ENST00000559193 UTRNP46939 3433 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 PGK2P07205 417 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 RGS7P49802 495 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 AMHR2Q16671 573 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 UNC5AQ6ZN44 842 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 CCDC110Q8TBZ0 833 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 NRG4Q8WWG1 115 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 COPS5Q92905 334 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 ZNF333Q96JL9 665 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 MMADHCQ9H3L0 296 aaPredicted RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 MKS1Q9NXB0 559 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 KCNK4Q9NYG8 393 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 CCDC195A0A1B0GUA6 201 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 I3L4J1 428 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 DPYSL4O14531 572 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 APOEP02649 317 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 P4HA1P13674 534 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 GCKP35557 465 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 SLC10A6Q3KNW5 377 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 ZNF534Q76KX8 674 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 C12orf29Q8N999 325 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 SNRNP25Q9BV90 132 aaKnown RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 SLC13A1Q9BZW2 595 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 PDZD7Q9H5P4 517 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 ZNF395Q9H8N7 513 aaPredicted RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 PRMT7Q9NVM4 692 aaPredicted RBP17.21■□□□□ 0.35
SPG11-215ENST00000559193 SIRPGQ9P1W8 387 aa17.21■□□□□ 0.35
SPG11-215ENST00000559193 CYB561D2O14569 222 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 NVLO15381 856 aaKnown RBP17.2■□□□□ 0.34
SPG11-215ENST00000559193 PSMG1O95456 288 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 LINGO3P0C6S8 592 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 MCF2P10911 925 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 VHLP40337 213 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 MAGEA3P43357 314 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 TMPRSS15P98073 1019 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 OCRLQ01968 901 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 VGLL4Q14135 290 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 CCDC6Q16204 474 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms