RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
TRPM1-210ENST00000559179 SLC39A2Q9NP94 309 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 KBTBD4Q9NVX7 518 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 SUSD2Q9UGT4 822 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 WASF3Q9UPY6 502 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 RAD54BQ9Y620 910 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 UBE4BO95155 1302 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 USP24Q9UPU5 2620 aa13.05□□□□□ -0.32
TRPM1-210ENST00000559179 MYH10P35580 1976 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 MEI4A8MW99 385 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 STAU1O95793 577 aaKnown RBP13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 CCDC130P13994 396 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 NDUFV2P19404 249 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ADORA2BP29275 332 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 DGKGP49619 791 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 AP3M2P53677 418 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ORC1Q13415 861 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 CUL4AQ13619 759 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 NCOA4Q13772 614 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 STARD3Q14849 445 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ZNF423Q2M1K9 1284 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 WDR45BQ5MNZ6 344 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 WBP2Q969T9 261 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ELMO3Q96BJ8 720 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 ACOX2Q99424 681 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 MIR1-1HGQ9H1L0 117 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 FAM49BQ9NUQ9 324 aa13.04□□□□□ -0.32
TRPM1-210ENST00000559179 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
TRPM1-210ENST00000559179 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 UPK3BL1B0FP48 263 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 UPK3BL2E5RIL1 263 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 SH3BP5O60239 455 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 TBX18O95935 607 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 FAM200BP0CF97 657 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 MAOBP27338 520 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 AFMP43652 599 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 RING1Q06587 406 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 SNX30Q5VWJ9 437 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 EPM2AIP1Q7L775 607 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 MIB1Q86YT6 1006 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 SETD7Q8WTS6 366 aaKnown RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 FOXJ1Q92949 421 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 ZFRQ96KR1 1074 aaKnown RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 C7orf25Q9BPX7 421 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 SLC6A17Q9H1V8 727 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 FAM13BQ9NYF5 915 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 PLK2Q9NYY3 685 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
TRPM1-210ENST00000559179 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
TRPM1-210ENST00000559179 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 STX6O43752 255 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 SYNCRIPO60506 623 aaKnown RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 CUTAO60888 179 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 CASP1P29466 404 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 NDST1P52848 882 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 FAM193AP78312 1265 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 ARID5AQ03989 594 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 PEAR1Q5VY43 1037 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 HTR3DQ70Z44 454 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 FUKQ8N0W3 1084 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 LINC00301Q8NCQ3 95 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 UCMAQ8WVF2 138 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 SMOQ99835 787 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
TRPM1-210ENST00000559179 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
TRPM1-210ENST00000559179 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
TRPM1-210ENST00000559179 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
TRPM1-210ENST00000559179 PI4KAP42356 2102 aa13.01□□□□□ -0.33
TRPM1-210ENST00000559179 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms