RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HMGXB4Q9UGU5 601 aa6.41□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYO15AQ9UKN7 3530 aa6.4□□□□□ -1.38
CTDSPL2-204ENST00000558966 CACNA1IQ9P0X4 2223 aa6.4□□□□□ -1.38
CTDSPL2-204ENST00000558966 DMDP11532 3685 aa6.4□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYH10P35580 1976 aa6.4□□□□□ -1.38
CTDSPL2-204ENST00000558966 MIA3Q5JRA6 1907 aa6.4□□□□□ -1.38
CTDSPL2-204ENST00000558966 SHISA7A6NL88 538 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 HEPACAM2A8MVW5 462 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CLDN5O00501 218 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 PSMA7O14818 248 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 PI15O43692 258 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 MMP20O60882 483 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CLSTN1O94985 981 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 AOC1P19801 751 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 GTF2H1P32780 548 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 MXI1P50539 228 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CLCN5P51795 746 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 NDST1P52848 882 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 FKBP3Q00688 224 aaKnown RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 STIM1Q13586 685 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 MLF2Q15773 248 aaPredicted RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 TAF12Q16514 161 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CBWD6Q4V339 395 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 ARHGAP15Q53QZ3 475 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CBWD3Q5JTY5 395 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CBWD5Q5RIA9 395 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 KRT39Q6A163 491 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 KLHL10Q6JEL2 608 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 TTI2Q6NXR4 508 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 NXPE4Q6UWF7 544 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 CLEC17AQ6ZS10 378 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 PAQR9Q6ZVX9 377 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 RAB44Q7Z6P3 723 aaPredicted RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 FAM35AQ86V20 835 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 GALNT12Q8IXK2 581 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 SEMA4DQ92854 862 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 DHTKD1Q96HY7 919 aaPredicted RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 MYRFLQ96LU7 910 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 FRMD6Q96NE9 622 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 GCNAQ96QF7 691 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 TWNKQ96RR1 684 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 SLC46A2Q9BY10 475 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 B3GNT5Q9BYG0 378 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 KCNH6Q9H252 994 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 TASP1Q9H6P5 420 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 C12orf49Q9H741 205 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 TBC1D17Q9HA65 648 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 LATS2Q9NRM7 1088 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 ZFATQ9P243 1243 aa6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 MAGED2Q9UNF1 606 aaPredicted RBP6.4□□□□□ -1.39
CTDSPL2-204ENST00000558966 PATJQ8NI35 1801 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 F8VP50 259 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 ARNTLO00327 626 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 RARAP10276 462 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 P4HA1P13674 534 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 PSMC3P17980 439 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CD33P20138 364 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 GRIK1P39086 918 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 PPP1R2P41236 205 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 STARD6P59095 220 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 INCA1Q0VD86 236 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 TCF15Q12870 199 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CAMK4Q16566 473 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 SLC44A4Q53GD3 710 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 TXNDC8Q6A555 127 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 ACOT1Q86TX2 421 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 MFSD6LQ8IWD5 586 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 FUKQ8N0W3 1084 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 RIN3Q8TB24 985 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 DEPDC1BQ8WUY9 529 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 NELFBQ8WX92 580 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 SLC35C1Q96A29 364 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CRELD1Q96HD1 420 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 SPATA17Q96L03 361 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 C8orf48Q96LL4 319 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CEP295NLQ96MC4 621 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 TRMT61BQ9BVS5 477 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 TTLL2Q9BWV7 592 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 IMPG2Q9BZV3 1241 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 FOXQ1Q9C009 403 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 ELOVL4Q9GZR5 314 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 SMG9Q9H0W8 520 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 BRD9Q9H8M2 597 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 HEBP1Q9NRV9 189 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 GMPR2Q9P2T1 348 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CCL26Q9Y258 94 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 HELZP42694 1942 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 ZFHX2Q9C0A1 2572 aaPredicted RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 STX10O60499 249 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CCDC130P13994 396 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 NFKB1P19838 968 aa6.39□□□□□ -1.39
CTDSPL2-204ENST00000558966 CD72P21854 359 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms