RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 SYCE2Q6PIF2 218 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 BHLHA9Q7RTU4 235 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 GRASPQ7Z6J2 395 aaPredicted RBP10.07□□□□□ -0.8
CUX1-216ENST00000558469 SCD5Q86SK9 330 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 MON1AQ86VX9 555 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 TMC8Q8IU68 726 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 ARHGAP18Q8N392 663 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 PDZD8Q8NEN9 1154 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 CMASQ8NFW8 434 aaPredicted RBP10.07□□□□□ -0.8
CUX1-216ENST00000558469 JOSD2Q8TAC2 188 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 SLC35G2Q8TBE7 412 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 OVCA2Q8WZ82 227 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 EDEM1Q92611 657 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.83e-6■■■■□ 19.9
CUX1-216ENST00000558469 MCEEQ96PE7 176 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 LRRC3Q9BY71 257 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 NMUR1Q9HB89 426 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 MRPL47Q9HD33 250 aaKnown RBP10.07□□□□□ -0.8
CUX1-216ENST00000558469 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
CUX1-216ENST00000558469 ABCC13Q9NSE7 274 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 MTMR10Q9NXD2 777 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 TRPM5Q9NZQ8 1165 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 CLEC1BQ9P126 229 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 DUSP10Q9Y6W6 482 aa10.07□□□□□ -0.8
CUX1-216ENST00000558469 CAPN9O14815 690 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 ZSCAN12O43309 604 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 KRT86O43790 486 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 TBX10O75333 385 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 PAPLNO95428 1278 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 F11P03951 625 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 RHOP08100 348 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 GLI1P08151 1106 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 POU2F2P09086 479 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 RALAP11233 206 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 NCAM1P13591 858 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 HOXB8P17481 243 aaPredicted RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 LTBRP36941 435 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 NOP2P46087 812 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 PPP3CCP48454 512 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 NAP1L1P55209 391 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 NTHL1P78549 312 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 SKIV2LQ15477 1246 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 PABPC1LQ4VXU2 614 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 DCAF6Q58WW2 860 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 GAREM2Q75VX8 874 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 PDZD4Q76G19 769 aaPredicted RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 TMEM150AQ86TG1 271 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 DEFB106AQ8N104 65 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 EMC1Q8N766 993 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 ZNF564Q8TBZ8 553 aaPredicted RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 PABPC5Q96DU9 382 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 ATXN3LQ9H3M9 355 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 IL21Q9HBE4 155 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 LZTFL1Q9NQ48 299 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 ASNSD1Q9NWL6 643 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 OSER1Q9NX31 292 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 TRMT1Q9NXH9 659 aaKnown RBP10.06□□□□□ -0.8
CUX1-216ENST00000558469 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 GUCA1BQ9UMX6 200 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 COG5Q9UP83 839 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 NAALADL1Q9UQQ1 740 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 BRWD1Q9NSI6 2320 aa10.06□□□□□ -0.8
CUX1-216ENST00000558469 A0A0A6YYK5 440 aaPredicted RBP10.05□□□□□ -0.8
CUX1-216ENST00000558469 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 MACROD2A1Z1Q3 448 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 ZNF840PA6NDX5 716 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 TMEM191CA6NGB0 347 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 BTNL10A8MVZ5 291 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 BUB1O43683 1085 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 TADA3O75528 432 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 DAB1O75553 588 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 FGF19O95750 216 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 FYNP06241 537 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 ZDHHC11BP0C7U3 371 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 RARGP13631 454 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 PDGFRAP16234 1089 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 GJA1P17302 382 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 GPD1P21695 349 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 CDC25CP30307 473 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 FLT3P36888 993 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 CCR2P41597 374 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 MATKP42679 507 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 EPHA5P54756 1037 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 CYP4F8P98187 520 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 ITIH3Q06033 890 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 CLUL1Q15846 466 aa10.05□□□□□ -0.8
CUX1-216ENST00000558469 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms