RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 MRPL45Q9BRJ2 306 aaKnown RBP10.87□□□□□ -0.67
TPM1-212ENST00000558347 INTS2Q9H0H0 1204 aaKnown RBP10.87□□□□□ -0.67
TPM1-212ENST00000558347 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 VPS18Q9P253 973 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 CDH9Q9ULB4 789 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 HPCAL4Q9UM19 191 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 MAGED2Q9UNF1 606 aaPredicted RBP10.87□□□□□ -0.67
TPM1-212ENST00000558347 WDR87Q6ZQQ6 2873 aa10.87□□□□□ -0.67
TPM1-212ENST00000558347 PATJQ8NI35 1801 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 PDE2AO00408 941 aaPredicted RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 SRGAP2O75044 1071 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 VNN1O95497 513 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 F11P03951 625 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 IVLP07476 585 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 PLEKP08567 350 aaPredicted RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 CSH1P0DML2 217 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 CSH2P0DML3 217 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 UCHL3P15374 230 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 ACTN2P35609 894 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 NBL1P41271 181 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 PAFAH1B1P43034 410 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 HNRNPH2P55795 449 aaKnown RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 FCHO2Q0JRZ9 810 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 TRPC3Q13507 836 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 ARHGAP15Q53QZ3 475 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 HGSNATQ68CP4 663 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 SPATA2LQ8IUW3 424 aaPredicted RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 E2F7Q96AV8 911 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 ELMO3Q96BJ8 720 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 FUBP3Q96I24 572 aaKnown RBP eCLIP10.86□□□□□ -0.67
TPM1-212ENST00000558347 CAPZA3Q96KX2 299 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 GCNAQ96QF7 691 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 OSBPL9Q96SU4 736 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 SLC46A2Q9BY10 475 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 SMG9Q9H0W8 520 aaKnown RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 DPEP3Q9H4B8 488 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 TASP1Q9H6P5 420 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 RAB20Q9NX57 234 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 AIPL1Q9NZN9 384 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 APEX2Q9UBZ4 518 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 TFR2Q9UP52 801 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 CAPN6Q9Y6Q1 641 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 DUSP10Q9Y6W6 482 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 KIF26AQ9ULI4 1882 aaPredicted RBP10.86□□□□□ -0.67
TPM1-212ENST00000558347 FRYLO94915 3013 aa10.86□□□□□ -0.67
TPM1-212ENST00000558347 ZFHX2Q9C0A1 2572 aaPredicted RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 GRID2IPA4D2P6 1211 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 SLC38A8A6NNN8 435 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 PROB1E7EW31 1015 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 CES2O00748 559 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 CHADO15335 359 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 MOCS3O95396 460 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 WEE1P30291 646 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 GNL1P36915 607 aaPredicted RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 LMAN1P49257 510 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 RPL10AP62906 217 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 TNNC1P63316 161 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 NNTQ13423 1086 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 FZD5Q13467 585 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 BIRC3Q13489 604 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 TXNDC8Q6A555 127 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 ZNF852Q6ZMS4 543 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 C1orf210Q8IVY1 113 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 SCN4BQ8IWT1 228 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 MAML2Q8IZL2 1156 aaPredicted RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 OR6B3Q8NGW1 331 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 TAS1R2Q8TE23 839 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 ZFYVE19Q96K21 471 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 OSBPL6Q9BZF3 934 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 TSPYL1Q9H0U9 437 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 TRPV5Q9NQA5 729 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 NXF1Q9UBU9 619 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 BZW2Q9Y6E2 419 aaKnown RBP10.85□□□□□ -0.67
TPM1-212ENST00000558347 PIAS3Q9Y6X2 628 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 CFAP54Q96N23 3096 aa10.85□□□□□ -0.67
TPM1-212ENST00000558347 DPYSL4O14531 572 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 PHACTR2O75167 634 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 BDNFP23560 247 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ATICP31939 592 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 MAGEA11P43364 429 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 TNNT3P45378 269 aaPredicted RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 SOX9P48436 509 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 CDH8P55286 799 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 JAM2P57087 298 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 APBA1Q02410 837 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms