RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ADCY4Q8NFM4 1077 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 POP5Q969H6 163 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 DDX50Q9BQ39 737 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 EIF2AK1Q9BQI3 630 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 NINJ2Q9NZG7 142 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PNPLA7Q6ZV29 1317 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 CCDC162PA2VCL2 907 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 AKT1P31749 480 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 CSE1LP55060 971 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 OLR1P78380 273 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 MRPS22P82650 360 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 TAF5Q15542 800 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 MPOP05164 745 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC26A3P40879 764 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PTGER2P43116 358 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 ACADVLP49748 655 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 DRG2P55039 364 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 PLIN5Q00G26 463 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 FUT11Q495W5 492 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 DCAF15Q66K64 600 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 KIAA0408Q6ZU52 694 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 STK32CQ86UX6 486 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 DRAXINQ8NBI3 349 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 NEDD1Q8NHV4 660 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 AGO2Q9UKV8 859 aaKnown RBP12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 FLT1P17948 1338 aa12.12□□□□□ -0.47
CSPG4P12-201ENST00000558282 SPDYE5A6NIY4 337 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MEI4A8MW99 385 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 BIRC5O15392 142 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 HUS1O60921 280 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 TDP2O95551 362 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SOX11P35716 441 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 TPI1P60174 286 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ADAM17P78536 824 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SPDYE7PQ495Y7 208 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MTMR8Q96EF0 704 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 RAB26Q9ULW5 256 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 XDHP47989 1333 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MRASO14807 208 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 CTDNEP1O95476 244 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ALOX15P16050 662 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MAPK1P28482 360 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 RGS4P49798 205 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 DPYSQ14117 519 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 STXBP2Q15833 593 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 OTUD3Q5T2D3 398 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MZT2AQ6P582 158 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 PIK3C3Q8NEB9 887 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 DQX1Q8TE96 717 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 DYNLL2Q96FJ2 89 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 BTBD9Q96Q07 612 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZCWPW1Q9H0M4 648 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 CDH9Q9ULB4 789 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 PRPF19Q9UMS4 504 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 AGLP35573 1532 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 NR5A2O00482 541 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ACAP1Q15027 740 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 TFDP3Q5H9I0 405 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 TTC30BQ8N4P2 665 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 BTN2A2Q8WVV5 523 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZHX1-C8orf76Q96EF9 292 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SRPK1Q96SB4 655 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 DGCR6LQ9BY27 220 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZSCAN32Q9NX65 697 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC12A4Q9UP95 1085 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 GLI2P10070 1586 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 INPP4BO15327 924 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 NDUFS3O75489 264 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SUPT7LO94864 414 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 PSMC5P62195 406 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 VAC14Q08AM6 782 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 NT5DC1Q5TFE4 455 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 BICRALQ6AI39 1079 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms