RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 NME3Q13232 169 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 BRD3Q15059 726 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 USP41Q3LFD5 358 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 ANKS3Q6ZW76 656 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 CCDC185Q8N715 623 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 CCDC26Q8TAB7 109 aa21.3■■□□□ 1
SNRPA1-205ENST00000558036 SNRNP25Q9BV90 132 aaKnown RBP21.3■■□□□ 1
SNRPA1-205ENST00000558036 M0QYT0 321 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 COILP38432 576 aaPredicted RBP21.29■■□□□ 1
SNRPA1-205ENST00000558036 PM20D1Q6GTS8 502 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 MAATS1Q7Z4T9 603 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 DDX42Q86XP3 938 aaKnown RBP eCLIP21.29■■□□□ 1
SNRPA1-205ENST00000558036 CCDC105Q8IYK2 499 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 IFT81Q8WYA0 676 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 FUBP3Q96I24 572 aaKnown RBP eCLIP21.29■■□□□ 1
SNRPA1-205ENST00000558036 GDAP1L1Q96MZ0 367 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 ZNF558Q96NG5 402 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 NPY6RQ99463 290 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 TRIM31Q9BZY9 425 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 PNPLA8Q9NP80 782 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 TMPRSS4Q9NRS4 437 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 SAE1Q9UBE0 346 aaPredicted RBP21.29■■□□□ 1
SNRPA1-205ENST00000558036 USP3Q9Y6I4 520 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 LAMA3Q16787 3333 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 MTMR11A4FU01 709 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 CAPN2P17655 700 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 CARSP49589 748 aaKnown RBP21.29■■□□□ 1
SNRPA1-205ENST00000558036 COPS2P61201 443 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 FPGSQ05932 587 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 KIAA1841Q6NSI8 718 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 TMCO3Q6UWJ1 677 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 CCNI2Q6ZMN8 369 aaPredicted RBP21.29■■□□□ 1
SNRPA1-205ENST00000558036 FBXO22Q8NEZ5 403 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 SLC7A14Q8TBB6 771 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 CASKIN2Q8WXE0 1202 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 NT5C3BQ969T7 300 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 DCLK3Q9C098 648 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 LRRC19Q9H756 370 aa21.29■■□□□ 1
SNRPA1-205ENST00000558036 H7C4K7 107 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 TJP3O95049 919 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 FGBP02675 491 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 GPR17Q13304 367 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 BSPRYQ5W0U4 402 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 RNF168Q8IYW5 571 aaPredicted RBP21.28■■□□□ 1
SNRPA1-205ENST00000558036 SLC39A11Q8N1S5 342 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 C12orf50Q8NA57 414 aaPredicted RBP21.28■■□□□ 1
SNRPA1-205ENST00000558036 SEPT5Q99719 369 aaPredicted RBP21.28■■□□□ 1
SNRPA1-205ENST00000558036 GDF3Q9NR23 364 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PIGVQ9NUD9 493 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PTPRDP23468 1912 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PTGIRP43119 386 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 USP46P62068 366 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 DPYSL3Q14195 570 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PSMD5Q16401 504 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 BOLA3Q53S33 107 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PPP6R3Q5H9R7 873 aaPredicted RBP21.28■■□□□ 1
SNRPA1-205ENST00000558036 STRADAQ7RTN6 431 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 JAMLQ86YT9 394 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 CMTR2Q8IYT2 770 aaKnown RBP21.28■■□□□ 1
SNRPA1-205ENST00000558036 COLGALT1Q8NBJ5 622 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 MAIP1Q8WWC4 291 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 TMEM169Q96HH4 297 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 ARFGAP3Q9NP61 516 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 PCYOX1Q9UHG3 505 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 STAP1Q9ULZ2 295 aa21.28■■□□□ 1
SNRPA1-205ENST00000558036 CST8O60676 142 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 TUBBP07437 444 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 OR1D2P34982 312 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 PTPN7P35236 360 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 ARSEP51690 589 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 DUSP4Q13115 394 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 PPIGQ13427 754 aaKnown RBP eCLIP21.27■■□□□ 12e-11■■□□□ 12.5
SNRPA1-205ENST00000558036 KRT81Q14533 505 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 PPP2R5EQ16537 467 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 MGAT5BQ3V5L5 792 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 VSTM1Q6UX27 236 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 IFT20Q8IY31 132 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 DPH5Q9H2P9 285 aa21.27■■□□□ 1
SNRPA1-205ENST00000558036 WDR27A2RRH5 827 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 MCM3P25205 808 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 TAZQ16635 292 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 BEND6Q5SZJ8 279 aaPredicted RBP21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 ERMARDQ5T6L9 678 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 RFX6Q8HWS3 928 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 PYROXD2Q8N2H3 581 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 AUTS2Q8WXX7 1259 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 DHX35Q9H5Z1 703 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 NFU1Q9UMS0 254 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 IL4RP24394 825 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 FNTAP49354 379 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 ROR1Q01973 937 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 DEUP1Q05D60 604 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 DHX34Q14147 1143 aaKnown RBP21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 BNIPLQ7Z465 357 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 TEKT4Q8WW24 435 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 IRGQQ8WZA9 623 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 PCDH18Q9HCL0 1135 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 MTRRQ9UBK8 725 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 AP4E1Q9UPM8 1137 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms