RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TAF5Q15542 800 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 ASTE1Q2TB18 679 aaPredicted RBP22.28■■□□□ 1.16
CASC4-204ENST00000557945 C10orf120Q5SQS8 335 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 ZSCAN18Q8TBC5 510 aaPredicted RBP22.28■■□□□ 1.16
CASC4-204ENST00000557945 RNF139Q8WU17 664 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 CYP2S1Q96SQ9 504 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 ABCC13Q9NSE7 274 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.28■■□□□ 1.16
CASC4-204ENST00000557945 ZMYM5Q9UJ78 669 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 NUDT5Q9UKK9 219 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 USTQ9Y2C2 406 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 CAPN9O14815 690 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 OAS1P00973 400 aaKnown RBP22.27■■□□□ 1.16
CASC4-204ENST00000557945 CKMP06732 381 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 LAMP2P13473 410 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 FECHP22830 423 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 AVPR1AP37288 418 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 TUBP50607 506 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 RNASE9P60153 205 aaKnown RBP22.27■■□□□ 1.16
CASC4-204ENST00000557945 YWHAZP63104 245 aaKnown RBP22.27■■□□□ 1.16
CASC4-204ENST00000557945 POTEHQ6S545 545 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 TADA2BQ86TJ2 420 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 ASB2Q96Q27 587 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 SLC22A12Q96S37 553 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 TRIM62Q9BVG3 475 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 ISCUQ9H1K1 167 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 WDR35Q9P2L0 1181 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 ZFP37Q9Y6Q3 630 aaPredicted RBP22.27■■□□□ 1.16
CASC4-204ENST00000557945 DENND4AQ7Z401 1863 aa22.27■■□□□ 1.16
CASC4-204ENST00000557945 SOWAHDA6NJG2 315 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 SOBPA7XYQ1 873 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 C2CD4DB7Z1M9 353 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 COCHO43405 550 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 HSF2BPO75031 334 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 TBX18O95935 607 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 GLI1P08151 1106 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 MBL2P11226 248 aaPredicted RBP22.26■■□□□ 1.15
CASC4-204ENST00000557945 NCAM1P13591 858 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 ABCB4P21439 1286 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 CYLC1P35663 651 aaPredicted RBP22.26■■□□□ 1.15
CASC4-204ENST00000557945 ATP5C1P36542 298 aaKnown RBP22.26■■□□□ 1.15
CASC4-204ENST00000557945 FAM78AQ5JUQ0 283 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 SLC26A9Q7LBE3 791 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 CCDC170Q8IYT3 715 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 CMTM8Q8IZV2 173 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 ZNF653Q96CK0 615 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 TRIM11Q96F44 468 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 VCPIP1Q96JH7 1222 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 CDK5RAP1Q96SZ6 601 aaKnown RBP22.26■■□□□ 1.15
CASC4-204ENST00000557945 RNF38Q9H0F5 515 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 SMG9Q9H0W8 520 aaKnown RBP22.26■■□□□ 1.15
CASC4-204ENST00000557945 POPDC2Q9HBU9 364 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 ASNSD1Q9NWL6 643 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 COL6A3P12111 3177 aa22.26■■□□□ 1.15
CASC4-204ENST00000557945 MDM4O15151 490 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 PFKLP17858 780 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 RRM1P23921 792 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 SCNN1AP37088 669 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 DNAJC24Q6P3W2 148 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 ARID3BQ8IVW6 561 aaPredicted RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 TTC16Q8NEE8 873 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 ST13P5Q8NFI4 369 aaPredicted RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 SMARCD2Q92925 531 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 SELENOOQ9BVL4 669 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 METTL5Q9NRN9 209 aaKnown RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 EPS15L1Q9UBC2 864 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 NENFQ9UMX5 172 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 NAALADL1Q9UQQ1 740 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 OBSL1O75147 1896 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 ATMINO43313 823 aaPredicted RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 PTMAP06454 111 aaKnown RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 EFEMP1Q12805 493 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 DEFB106AQ8N104 65 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 KHSRPQ92945 711 aaKnown RBP eCLIP22.25■■□□□ 1.151e-8■■■□□ 14.6
CASC4-204ENST00000557945 ASB16Q96NS5 453 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 OLA1Q9NTK5 396 aaKnown RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 SMPD4Q9NXE4 827 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 MYO1AQ9UBC5 1043 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 CNOT8Q9UFF9 292 aaKnown RBP22.25■■□□□ 1.15
CASC4-204ENST00000557945 RASAL2Q9UJF2 1139 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 DNMT3LQ9UJW3 386 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 ANAPC1Q9H1A4 1944 aa22.25■■□□□ 1.15
CASC4-204ENST00000557945 DENND4CQ5VZ89 1909 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 GJB6O95452 261 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 PRAMEF12O95522 483 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 FYNP06241 537 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 MYBL1P10243 752 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 MTF1Q14872 753 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 DCAF6Q58WW2 860 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 MIB1Q86YT6 1006 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 TMEM139Q8IV31 216 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 ADHFE1Q8IWW8 467 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 PLCD3Q8N3E9 789 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 C3orf20Q8ND61 904 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 SLC2A13Q96QE2 648 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 TDP1Q9NUW8 608 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 PRKAG3Q9UGI9 489 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 CPQQ9Y646 472 aa22.24■■□□□ 1.15
CASC4-204ENST00000557945 DPYSL4O14531 572 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 DAB1O75553 588 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms