RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FAM53CQ9NYF3 392 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 STIM2Q9P246 746 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 INPP5FQ9Y2H2 1132 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 SCN1AP35498 2009 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ESYT3A0FGR9 886 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 MYBPHLA2RUH7 354 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 C2CD4BA6NLJ0 364 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ENPP3O14638 875 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 PQBP1O60828 265 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 LRCH4O75427 683 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 GRAP2O75791 330 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 BEST1O76090 585 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 DDHD2O94830 711 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 HEXIM1O94992 359 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 EOMESO95936 686 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ITGB1P05556 798 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ALAS2P22557 587 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 PSMA2P25787 234 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 IL1R2P27930 398 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 TNFRSF8P28908 595 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 GJC1P36383 396 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 BRCC3P46736 316 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 CARSP49589 748 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 DGKGP49619 791 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 CDR1P51861 262 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 BCAT1P54687 386 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 GUCY2DQ02846 1103 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 BST2Q10589 180 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 KLF1Q13351 362 aaPredicted RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 TUSC3Q13454 348 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 BFSP2Q13515 415 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 PIGHQ14442 188 aaPredicted RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 CYP1B1Q16678 543 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 PAN2Q504Q3 1202 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 RAB6CQ53S08 254 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 PLEKHG4Q58EX7 1191 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 LRRC38Q5VT99 294 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 TTC27Q6P3X3 843 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 DSTYKQ6XUX3 929 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 SLC24A5Q71RS6 500 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RHOT1Q8IXI2 618 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 TMEM86AQ8N2M4 240 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 DBF4BQ8NFT6 615 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 IPO4Q8TEX9 1081 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 CLEC4CQ8WTT0 213 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 STK32AQ8WU08 396 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RXFP2Q8WXD0 754 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RSPH1Q8WYR4 309 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RAPGEF5Q92565 580 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RUBCNQ92622 972 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 NAP1L3Q99457 506 aaPredicted RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 FUT8Q9BYC5 575 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 B3GNT5Q9BYG0 378 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 SEZ6LQ9BYH1 1024 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 RAB6CQ9H0N0 254 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 SLITRK6Q9H5Y7 841 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 EPB41L5Q9HCM4 733 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ARFGAP3Q9NP61 516 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 ST7Q9NRC1 585 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 DDX43Q9NXZ2 648 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 NOP53Q9NZM5 478 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 HESX1Q9UBX0 185 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
SPG11-204ENST00000557866 R3HDM2Q9Y2K5 976 aaKnown RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.74□□□□□ -1.17
SPG11-204ENST00000557866 CITO14578 2027 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 C3orf70A6NLC5 250 aaPredicted RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 PI4K2BG5E9Z4 385 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 M0QZQ0 153 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MAP2K7O14733 419 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TTI1O43156 1089 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 PHF2O75151 1096 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 B3GAT3O94766 335 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TRUB2O95900 331 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 CYP11A1P05108 521 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 RALAP11233 206 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 HSPA6P17066 643 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 COL8A1P27658 744 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 ECHS1P30084 290 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MIPP30301 263 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 FLT3P36888 993 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SSR1P43307 286 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 KCNJ1P48048 391 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 LHX1P48742 406 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 GATMP50440 423 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 ZNF143P52747 638 aaPredicted RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 RABGGTBP53611 331 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 CACNA2D1P54289 1103 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SLC6A3Q01959 620 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 DSC1Q08554 894 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 ADCY1Q08828 1119 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SFSWAPQ12872 951 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 C15orf59Q2T9L4 293 aaPredicted RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 CCDC14Q49A88 953 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MDH1BQ5I0G3 518 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 NOMO2Q5JPE7 1267 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 FAM102AQ5T9C2 384 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms