RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SPACA7Q96KW9 195 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 CYLDQ9NQC7 956 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 RMND1Q9NWS8 449 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 BCCIPQ9P287 314 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHMT2-235ENST00000557740 DEC1Q9P2X7 70 aa15.44■□□□□ 0.06
SHMT2-235ENST00000557740 TPRP12270 2363 aaKnown RBP15.44■□□□□ 0.06
SHMT2-235ENST00000557740 GOLGA6L4A6NEF3 574 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 ANTXRLA6NF34 631 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 HHLA1C9JL84 531 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 SGK1O00141 431 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 CETN3O15182 167 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TULP3O75386 442 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TBX18O95935 607 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 KIR2DL1P43626 348 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-235ENST00000557740 PGFP49763 221 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 PNOCQ13519 176 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 C10orf76Q5T2E6 689 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 PMS2CLQ68D20 193 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TMEM92Q6UXU6 159 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TRMT11Q7Z4G4 463 aaKnown RBP15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TADA2BQ86TJ2 420 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 ETFBKMTQ8IXQ9 262 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TTC39CQ8N584 583 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 FBXL13Q8NEE6 735 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 WBP2Q969T9 261 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 EEF2KMTQ96G04 330 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 TSG101Q99816 390 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 KLF16Q9BXK1 252 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-235ENST00000557740 KIAA1549LQ6ZVL6 1849 aa15.43■□□□□ 0.06
SHMT2-235ENST00000557740 A0A0A0MRY4 1105 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 A0A1W2PQH9 124 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 TCRBV21S2A2A0A5A6 115 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 BCLAF3A2AJT9 711 aaKnown RBP15.42■□□□□ 0.06
SHMT2-235ENST00000557740 CAVIN2O95810 425 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 RARGP13631 454 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 ZNF394Q53GI3 561 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 STPG1Q5TH74 334 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 EMC10Q5UCC4 262 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 GRAMD4Q6IC98 578 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 TCEAL6Q6IPX3 200 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 HTR3DQ70Z44 454 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 CYP2U1Q7Z449 544 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 TMEM25Q86YD3 366 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 PHTF2Q8N3S3 785 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 ZNF513Q8N8E2 541 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-235ENST00000557740 TERB1Q8NA31 727 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 HMGB4Q8WW32 186 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 TCEAL3Q969E4 200 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 HEXIM2Q96MH2 286 aaKnown RBP15.42■□□□□ 0.06
SHMT2-235ENST00000557740 DUSP16Q9BY84 665 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 RXFP3Q9NSD7 469 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 DNAJC17Q9NVM6 304 aaKnown RBP15.42■□□□□ 0.06
SHMT2-235ENST00000557740 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.42■□□□□ 0.06
SHMT2-235ENST00000557740 OSER1Q9NX31 292 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 DNMT3LQ9UJW3 386 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 NAGPAQ9UK23 515 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 GTF3C3Q9Y5Q9 886 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 RALGAPA1Q6GYQ0 2036 aa15.42■□□□□ 0.06
SHMT2-235ENST00000557740 CNOT1A5YKK6 2376 aaKnown RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 NEDD8-MDP1E9PL57 170 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 SMC2O95347 1197 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 ADRB1P08588 477 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 RALAP11233 206 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 HNRNPLP14866 589 aaKnown RBP eCLIP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 BCKDHBP21953 392 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 DHPSP49366 369 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 PSEN1P49768 467 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 KIF11P52732 1056 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 DCAF17Q5H9S7 520 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 PPP1R26Q5T8A7 1209 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 TCERG1LQ5VWI1 586 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 RNF43Q68DV7 783 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 KLHDC10Q6PID8 442 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 TPGS1Q6ZTW0 290 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 CCDC186Q7Z3E2 898 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 PGBD3Q8N328 593 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 SEMA4DQ92854 862 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 FAXDC2Q96IV6 333 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 XPO6Q96QU8 1125 aaKnown RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 CDK5RAP1Q96SZ6 601 aaKnown RBP15.41■□□□□ 0.06
SHMT2-235ENST00000557740 EDEM2Q9BV94 578 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 BBS2Q9BXC9 721 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 ZDHHC4Q9NPG8 344 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 RAB20Q9NX57 234 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 WDR35Q9P2L0 1181 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 MYO16Q9Y6X6 1858 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 ACACBO00763 2458 aa15.41■□□□□ 0.06
SHMT2-235ENST00000557740 MDM4O15151 490 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 SLC16A3O15427 465 aaKnown RBP15.4■□□□□ 0.06
SHMT2-235ENST00000557740 MAP3K13O43283 966 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 CACNG3O60359 315 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 GREM1O60565 184 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 TYRP14679 529 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 PLA2G4AP47712 749 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 SLC8A3P57103 927 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 BYSLQ13895 437 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms