RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MAKP20794 623 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 PGDP52209 483 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 SEC24CP53992 1094 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 AP2B1P63010 937 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 SEMA3AQ14563 771 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 SF3B3Q15393 1217 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 SMAD1Q15797 465 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 ALFQ53S48 1182 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 VPS53Q5VIR6 699 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 Q6YL49 198 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 PARS2Q7L3T8 475 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 RASGRP3Q8IV61 690 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 CPXCR1Q8N123 301 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 FAM98AQ8NCA5 519 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 DNAJB14Q8TBM8 379 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 USP13Q92995 863 aaPredicted RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 FKBP10Q96AY3 582 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 C18orf8Q96DM3 657 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 EDC3Q96F86 508 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 KRTAP9-3Q9BYQ3 159 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 MYLK2Q9H1R3 596 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 WASH6PQ9NQA3 447 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 GRHPRQ9UBQ7 328 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 GTF2A1LQ9UNN4 478 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 SLC27A6Q9Y2P4 619 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 CEP83Q9Y592 693 aa2□□□□□ -2.09
HIF1A-212ENST00000557538 LRRFIP2Q9Y608 721 aaKnown RBP2□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC196A0A1B0GTZ2 297 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 A1L4Q6 167 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 AGPSO00116 658 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ACKR2O00590 384 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 FOXN1O15353 648 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 SNX2O60749 519 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM63AO94886 807 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ITGA2BP08514 1039 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 PECAM1P16284 738 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MATN1P21941 496 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 SFPQP23246 707 aaKnown RBP eCLIP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TBX2Q13207 712 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF169Q14929 603 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 PTPAQ15257 358 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ANO1Q5XXA6 986 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 LIN54Q6MZP7 749 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC144NLQ6NUI1 221 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MSANTD2Q6P1R3 559 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MOGAT3Q86VF5 341 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 LIX1LQ8IVB5 337 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TSPYL6Q8N831 410 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ANKRD42Q8N9B4 389 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 SIMC1Q8NDZ2 872 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 OR52L2PQ8NGH6 319 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 STK31Q9BXU1 1019 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 LRFN1Q9P244 771 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 C19orf53Q9UNZ5 99 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 CNTN6Q9UQ52 1028 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ENTPD2Q9Y5L3 495 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 GOLGA6L10A0A0M3HER8 536 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TOR1BO14657 336 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MATN3O15232 486 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MBPP02686 304 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ATF7P17544 494 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 GRIA3P42263 894 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ALDH18A1P54886 795 aaKnown RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 ACSM6Q6P461 480 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 FBXO38Q6PIJ6 1188 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MAVSQ7Z434 540 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MPP5Q8N3R9 675 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MYCT1Q8N699 235 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 EXD3Q8N9H8 876 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 MYCBPAPQ8TBZ2 947 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 PROKR1Q8TCW9 393 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 LTV1Q96GA3 475 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 PPM1MQ96MI6 270 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 HIST1H2AAQ96QV6 131 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 GPR20Q99678 358 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 C17orf80Q9BSJ5 609 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 GATA5Q9BWX5 397 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 WDR11Q9BZH6 1224 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM160Q9NX00 188 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 CDC23Q9UJX2 597 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 SNX14Q9Y5W7 946 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 NCANO14594 1321 aa1.99□□□□□ -2.09
HIF1A-212ENST00000557538 COL11A2P13942 1736 aaPredicted RBP1.99□□□□□ -2.09
HIF1A-212ENST00000557538 TAF4O00268 1085 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 NKX2-8O15522 239 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ORC4O43929 436 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 NDST3O95803 873 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ELFN1P0C7U0 828 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TNFRSF1AP19438 455 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MCM7P33993 719 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CHKAP35790 457 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TRAPPC10P48553 1259 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MAPK10P53779 464 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CACNA2D1P54289 1103 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ACTR2P61160 394 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CFHR3Q02985 330 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KRT17Q04695 432 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GPS1Q13098 491 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms