RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NUDCD1Q96RS6 583 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 SRPK1Q96SB4 655 aaKnown RBP18.42■□□□□ 0.54
XRCC3-218ENST00000557439 FRMD8P1Q9BZ68 369 aaPredicted RBP18.42■□□□□ 0.54
XRCC3-218ENST00000557439 VPS11Q9H270 941 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 GBA2Q9HCG7 927 aaPredicted RBP18.42■□□□□ 0.54
XRCC3-218ENST00000557439 SLC5A4Q9NY91 659 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 FETUBQ9UGM5 382 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 ZC3H7BQ9UGR2 993 aaKnown RBP18.42■□□□□ 0.54
XRCC3-218ENST00000557439 SNX9Q9Y5X1 595 aa18.42■□□□□ 0.54
XRCC3-218ENST00000557439 A0A0G2JLL6 359 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 UPP2O95045 317 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 METTL18O95568 372 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 LGALS2P05162 132 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 STIP1P31948 543 aaKnown RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 ARFIP2P53365 341 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 IRX4P78413 519 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 PARP6Q2NL67 630 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 PRRT2Q7Z6L0 340 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 TRIM55Q9BYV6 548 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 DPEP3Q9H4B8 488 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 ERAP1Q9NZ08 941 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 MARCOQ9UEW3 520 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 MAD1L1Q9Y6D9 718 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 APOL1O14791 398 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 CSH1P0DML2 217 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 CSH2P0DML3 217 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 KITP10721 976 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 SERPINB4P48594 390 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 SLC10A2Q12908 348 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 DSTYKQ6XUX3 929 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 ALYREFQ86V81 257 aaKnown RBP18.41■□□□□ 0.54
XRCC3-218ENST00000557439 C7orf31Q8N865 590 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 ARMC2Q8NEN0 867 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 NT5C1AQ9BXI3 368 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 ETNK2Q9NVF9 386 aa18.41■□□□□ 0.54
XRCC3-218ENST00000557439 DNAJC25-GNG10A0A024R161 153 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 NDC80O14777 642 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 PAPSS1O43252 624 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 DHRS4L1P0CG22 281 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 MCF2P10911 925 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 MYL2P10916 166 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 SESN3P58005 492 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 ZBTB16Q05516 673 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 TTLL12Q14166 644 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 TFDP2Q14188 446 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 TRIM68Q6AZZ1 485 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 LCLAT1Q6UWP7 414 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 OLFML1Q6UWY5 402 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 RFX8Q6ZV50 586 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 AFG1LQ8WV93 481 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 INPP5DQ92835 1189 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 ZMAT2Q96NC0 199 aaKnown RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 CADM1Q9BY67 442 aaKnown RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 RNPEPL1Q9HAU8 725 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 CITO14578 2027 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 COPEO14579 308 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 ATP5HO75947 161 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 CYP2C8P10632 490 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 HDAC4P56524 1084 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 CRADDP78560 199 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 ARHGAP1Q07960 439 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 PRKD1Q15139 912 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 C18orf25Q96B23 403 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-218ENST00000557439 LTBP3Q9NS15 1303 aa18.4■□□□□ 0.54
XRCC3-218ENST00000557439 CHADO15335 359 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 HAUS5O94927 633 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 DLDP09622 509 aaKnown RBP18.39■□□□□ 0.54
XRCC3-218ENST00000557439 YY1P25490 414 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.54
XRCC3-218ENST00000557439 SLC18A2Q05940 514 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 MROH9Q5TGP6 573 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 NDRG1Q92597 394 aaKnown RBP18.39■□□□□ 0.54
XRCC3-218ENST00000557439 ACAP3Q96P50 834 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 PGLYRP2Q96PD5 576 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 CEP41Q9BYV8 373 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 PHACTR1Q9C0D0 580 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 CYP3A43Q9HB55 503 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 TUBGCP4Q9UGJ1 667 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.54
XRCC3-218ENST00000557439 TSPAN1O60635 241 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 PDGFRBP09619 1106 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 TPBGLP0DKB5 382 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 OSBPP22059 807 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 PTPN4P29074 926 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 INCA1Q0VD86 236 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 TTLL4Q14679 1199 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 UNC5AQ6ZN44 842 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 RINLQ6ZS11 566 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 ZCCHC23Q6ZST2 131 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 BZW1Q7L1Q6 419 aaKnown RBP18.39■□□□□ 0.53
XRCC3-218ENST00000557439 ARMCX2Q7L311 632 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 SLC26A11Q86WA9 606 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 PYROXD2Q8N2H3 581 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 ALKBH8Q96BT7 664 aaKnown RBP18.39■□□□□ 0.53
XRCC3-218ENST00000557439 DHX35Q9H5Z1 703 aaKnown RBP18.39■□□□□ 0.53
XRCC3-218ENST00000557439 PCMTD2Q9NV79 361 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 CNTN3Q9P232 1028 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 PAK5Q9P286 719 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 GJD2Q9UKL4 321 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms